| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2393 |
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| Symbol | cobC |
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| ID | 1221239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2600549 |
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| End bp | 2601601 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637238793 |
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| Product | putative threonine-phosphate decarboxylase |
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| Protein accession | NP_520514 |
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| Protein GI | 17547112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0154482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CGCCCCGCTT CACCATCGCC CACGGCGGCA ACCTGGCCGC CGCGCGTGCG
CGCCACGGTG AGCCGTCCGG CGGCTGGGTC GACCTGTCCA CCGGCATCAA CCCGCACGGC
TATCCCGTCC CGCCGATCCC GCCCGAGGCA TGGCTGCGCC TGCCCGAAGA CGATGGCCTC
GAAGCCGCGG CAGCCTCGCA CTACGGTGTC GCAAGCGCAG ATGCGGTCCT GGCGGTGGCC
GGCTCGCAGG CGGCCATCCG CGCGCTGCCG CTGTTGCTGC CGCGCGGCCG GGTGGGCATC
GCCCGCATCG GCTACAGCGA ATACGCCCCC GCCTTTGCCC GCGCCGGCCA CGACGTCGTG
CTGCTGGATG AGCGGGACTT CCTCGACGCG ACGCTCCCCG ACGCGCTGAC GCATCTCGTC
GTCGTCAATC CGAACAACCC GACCGCGCGC TGCCTGCCGG CCGCCACGCT GCGCGACTGG
CATGCGCGGC TGTCCGCGCG CGGCGGCACG TTGATCGTCG ACGAGGCGTT CATCGAGACG
CTGGACGCGC CGCCCTCGCT GGCTCCGCTG GCCGGCGCGC CGGGGCTGAT CGTGCTGCGC
TCGATCGGCA AGTTCTATGG GCTGGCCGGC GCGCGCATCG GCTTCGTGCT GGGACCGCCG
GCGTGTCTGG CGGCGCTGCG CGAGGCGCTG GGCCACTGGA CCGTCAACGG CCCGGCGCGG
GCCGTGGTCC GGGCCGCGCT GGCCGATACG GCCTGGCAAA GCGCCACGCG CGCGCGCCTG
CGTGCCGAAG GCGCCCGCCT GTCCGCGCGG CTCGCCCGTC ATGGCCTGCC GAATGCATCC
ACGCCGCTGT TTGCGTGGGT GCCCACGCCG GACGCCGCCG CCCTGCACGC GGCACTGGCA
CGGCAGGGTC TCTGGACCCG ATTGTTCGAT GTACCCGGCA CGCCGCCCGT GCAGGGCCTG
CGCCTTGGCC TGCCGCCGGA TGCCTTCGGG TGGCAGCGCC TCGACGATGC GCTGGCCTCG
CTGCCGCTGT CCGCTGAAAC CACGTCCCGA TGA
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| Protein sequence | MSAAPRFTIA HGGNLAAARA RHGEPSGGWV DLSTGINPHG YPVPPIPPEA WLRLPEDDGL
EAAAASHYGV ASADAVLAVA GSQAAIRALP LLLPRGRVGI ARIGYSEYAP AFARAGHDVV
LLDERDFLDA TLPDALTHLV VVNPNNPTAR CLPAATLRDW HARLSARGGT LIVDEAFIET
LDAPPSLAPL AGAPGLIVLR SIGKFYGLAG ARIGFVLGPP ACLAALREAL GHWTVNGPAR
AVVRAALADT AWQSATRARL RAEGARLSAR LARHGLPNAS TPLFAWVPTP DAAALHAALA
RQGLWTRLFD VPGTPPVQGL RLGLPPDAFG WQRLDDALAS LPLSAETTSR
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