Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2389 |
Symbol | |
ID | 1221235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2596717 |
End bp | 2597370 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238789 |
Product | putative partition-related protein |
Protein accession | NP_520510 |
Protein GI | 17547108 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1192] ATPases involved in chromosome partitioning |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00467103 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGTGG CCGTGGTAGC GAATCCGAAG GGCGGGGTGG GCAAGACCAC GCTGGCGACC AACCTGGCCG GCTACTTCGC CGCGCGGGAT CATGCCGTGA TGCTGGGCGA TACCGACCGG CAGCAGTCCT CGCGCGAATG GCTGGCGCTG CGTCCGGCCA CCGCCAGGCC CATCCACACC TGGGACATCA GCGCCGACCA CATCGCCAAG CCGCCCAAGG GCACCACGCA TGTCGTGCTC GACACCCCGG CCGGCCTGCA CGGCTGGCGC CTCGCCGATC TCATCAGGCT CGCCGGCCAT GTGATCGTGC CGCTGCAGCC CTCGATGTTC GACATCCTGG CCACCCAGGC CTTCCTGTGC AAGCTGGCCG ACGAGAAACC GGTTCGCCAC GGCGAGGCCA AGGTGGGCGT GGTCGGCATG CGCGTGGACA TGCGCACGCG GGCGGCGGAG CAGCTGCAGC GCTTCGTGCA GGGTTTGCAG ATCCCGATTC TCGGCTACCT GCGCGACACC CAGAACTACG TGCAGCTCGC CGCGCACGGC CTGACGCTGT GGGATGTGGC CCCGTCGCGC GTGGCCAGGG ACGTGGAGCA GTGGCGCGGC ATCCTCGATT GGATGGCGCC CGGCGGAATC ACGGCGTCGC CCGATTCCAT GTAG
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Protein sequence | MPVAVVANPK GGVGKTTLAT NLAGYFAARD HAVMLGDTDR QQSSREWLAL RPATARPIHT WDISADHIAK PPKGTTHVVL DTPAGLHGWR LADLIRLAGH VIVPLQPSMF DILATQAFLC KLADEKPVRH GEAKVGVVGM RVDMRTRAAE QLQRFVQGLQ IPILGYLRDT QNYVQLAAHG LTLWDVAPSR VARDVEQWRG ILDWMAPGGI TASPDSM
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