Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2378 |
Symbol | |
ID | 1221224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2582487 |
End bp | 2583008 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637238778 |
Product | hypothetical protein |
Protein accession | NP_520499 |
Protein GI | 17547097 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.316906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00324928 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGATACGC CCGCCGAGCC GCTGCCGACC GAACACCCGT CCGTGCGCGT GGCGGTGGTG CTGTGCCGCC GGCCGACGGG CAACCGCTGG CAGCCGTTCC AGTGGCGGCT GGAGGCGGTG GTGCCCGACC TGGGCGAGTT CGGCGCGGTG CCGCGCTGCC TGGACCGCAC CGATGCGGCC GAGCGCTGGC TCACGCCCGG CTTCGGCGTC ACGCTGTTCC ACGACGAGGC CGAGGGCTAC TATCTGAACG CGACCGCCGC CGCGCCGTGC TGGTTCGTGC TGTGGCGCAT GGGCGAGCCG GACACGGCGG AGGCAGGCCG GGCCGTTCCG CACACGGTGT CGCTCAGCTA TAACGAGGCC GGCCGCTGGC TCGACGGCGG CGAGACGGTG GAGAACGTGC CGCTGGACGC CGCATCGCTC GCGTGGCTGC GGGCCTACGT GGAGCAGAAC TACCGGCCGG AGCCGAAGAA GCGGCGGCGG CCGGAGTCGT TCCTGTCGCC GGAAGACCGC GCGAAATATT GA
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Protein sequence | MDTPAEPLPT EHPSVRVAVV LCRRPTGNRW QPFQWRLEAV VPDLGEFGAV PRCLDRTDAA ERWLTPGFGV TLFHDEAEGY YLNATAAAPC WFVLWRMGEP DTAEAGRAVP HTVSLSYNEA GRWLDGGETV ENVPLDAASL AWLRAYVEQN YRPEPKKRRR PESFLSPEDR AKY
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