| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2373 |
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| Symbol | |
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| ID | 1221219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2575415 |
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| End bp | 2578414 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238773 |
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| Product | formate dehydrogenase large subunit |
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| Protein accession | NP_520494 |
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| Protein GI | 17547092 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00446398 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTCTGA CCCGCAAACC GGCGGCGCAG GATGCCAAGA CCGGGCAGGC AAGCCGCCCC
GGCGCCGCGA CGCTGTCCGG CAGCCTGGCG CGCGGCCTGG CCGGCGCGCT GCCGACCATG
GACCGGCGGA CCTTCCTCAA GCGCTCCGGC ATCGGCGTGG GCGCGGGGCT GGCGGCGTCG
CAGCTGTCGC TGGTGAAGAA GGCCACGGTG GTGGGCGAGG CCAGGGCGGC CGAAGGCAAG
GACGACATCG TGGTGCGGCG CACCGTGTGC TCGCATTGCT CGGTGGGCTG CGCGGTGGAT
GCGGTGGTGC AGAACGGCGT GTGGGTGCGC CAGGAGCCGG TGTTCGACTC GCCCATCAAC
ATGGGCGCGC ACTGCGCCAA GGGCGCCGCG CTGCGCGAGC ACGGCCACGG CGAATACCGC
CTGAAGACGC CGATGAAGCT GGTGGACGGG CGCTACCAGC GCATCAGCTG GGAGCAGGCG
CTCAACGAGA TCGTCGCCCG GATGAACGCC ATCCGCCAGG AGACCGGGCC CGATTCGTTC
TTCTTCGTCG GCTCGTCCAA GCACAGCAAC GAACAGTCGT ATCTGCTGCG CAAGTGGGTG
TCGTTCTTCG GCACCAACAA TTGCGACCAC CAGGCACGCA TCTGCCACTC CACCACCGTG
GCGGGCGTGG CGAACACCTG GGGCTACGGC GCGATGACCA ACTCGTACAA CGATATGCAG
AACGCCAAGT GCGCGCTGTA CATCGGCTCG AACGCGGCGG AGGCGCACCC GGTGTCGATG
CTGCATCTGC TGCATGCCAA GGAGACCGGT TGCAAGGTGA TCGTGGTCGA CCCGCGCTAT
ACGCGCACGG CGGCCAAGTC GGACGAGTAC GTGCGCATCC GCTCGGGCAC CGACATCGCC
TTCCTGTTCG GCGTGCTGCA CCACGTCTTC AAGAACGGCT GGGAAGACCG GCAGTTCATC
CATGACCGTG TCTACGGCAT GGACAAGGTA CGCGACGAGG TGCTCGCCAA GTGGACGCCG
GACAAGGTCG AGGCCGTCTG CGGCGTGCCC GAGGCGCAGG TGCGCAAGGT CGCCGAGATG
ATGGCGATGA ACCGCCCGAG CACGCTGGTG TGGTGCATGG GCCAGACCCA GCACACCATC
GGCAACGCCA TCGTGCGCGC TTCGTGCATC GTGCAACTGG CGCTGGGCAA CATCGGCCGG
CCGGGCGGCG GCGCCAACAT CTTCCGCGGC CACGACAACG TGCAGGGCGC CACCGACGTC
GGCCCCAACC CCGATTCGCT GCCCGGCTAC TACGGCCTGG CCGCCGGCGC GTGGAAGCAC
TACGCCGCCG TGTGGGGCGT GGACTACGAC TGGATCAAGG GCCGCTTCGC CTCACAGGCG
ATGATGGAGA AATCCGGCAC CACCGTCTCG CGCTGGATCG ATGCGGTGCT GGAGAAGAAC
GAACTGATCG ACCAGGACCA CAACGTCCGC GCGATGTTCT ACTGGGGCCA CGCGCCCAAC
TCGCAGACGC GCGGCCTGGA GATGAAGCGC GCGCTCGACA AGCTCGACCT GCTGGTGGTG
ATCGACCCCT ATCCGTCGGC CACCGCGGCG ATGGCCAACA TGCCCGCCGC CGACGGCACG
CCGCCCAATC CGAACCGCGC GGTCTACCTG CTGCCGGCCG CCACGCAGTT CGAGACCTCG
GGCTCGTGCA CCGCGTCCAA CCGCTCGCTG CAATGGCGCG AGAAGGTGAT CGAGCCGCTG
TTCGAGTCGC AGCCGGACCA CGTCATCATG CAGGCCCTGG CCGATCGGCT CGGCTTCGGC
AACGAGCTGT CGAAGCGCCT GAAGGTCACC GAGTACAAGC GCGCCGGCAT GACCTGGCGC
GAGCCCGGGA CCGAGTCGAT CCTGCGCGAG ATCAACCGCA GCAACTGGAC CATCGGCTAC
ACCGGCCAAT CGCCGGAGCG CCTGCAGGCG CATATGCGCA ACATGCACCT GTTCGACGTG
CGCACGCTGC GCTGCCAGGG CGGCAAGGAC CCGGTCACCG GCTACGATCT GACCGGCGAC
TACTTCGGCC TGCCGTGGCC GTGCTATGGC ACGCCGGAAT TGAAGCACCC CGGCTCGCCC
AACCTGTACG ACACCAGCAA GCACGTGATG GACGGCGGCG GCAACTTTCG CGCCAACTTT
GGCGTGGAGC GCGACGGCGT CAATCTGCTG GCCGAGGACG GCTCGTATTC GCTCGGTGCC
GAGCTGACCA CCGGCTACCC CGAGTTCGAC CACGTGTTTC TGAAGAAGCT GGGCTGGTGG
GACGACCTCA CCGATGTCGA GAAGAAGGCC GCCGAAGGCA AGAACTGGAA GACCGACCTG
TCGGGCGGCA TCCAGCGCGT GGCGATGAAG CACGGCTGCC ACCCCTTCGG CAATGCCAAG
GCGCGCGCCG TCGTGTGGAA CTTCCCCGAC CCGATCCCGC AGCACCGCGA GCCGCTGTAT
TCCACACGGC CCGACATGGT CGCCCAGTAC CCGACGCACG ACGACAAGAA GGCCTTCTGG
CGCCTGCCGA CGCTGTACAA GACCGTGCAG CAGCGCAATA TCGAAAACAA GGTCTATGAG
AAATTCCCGA TCATCCTGAC CTCCGGCCGG CTGGTCGAGT ACGAGGGCGG CGGCGAAGAG
ACGCGCTCCA ACCCTTGGCT GGCGGAGCTG CAGCAGGAGA ACTTCGTCGA GATCAACCCG
AAGGCCGCCG CCGACCGGGG CATCCGCAAC AACGACTACG TGTGGGTCAA GACGCCGACC
GGCGCGCAGA TCAAGGTGAG GGCGCTGGTG ACCGAGCGCG TGGGCGTGGA CCATGCCTTC
ATCCCGTTCC ACTTCTCGGG CTGGTGGCAG GGCAAGGACC TGCTCGACTA CTACCCCGAG
GGCGCTCACC CGATCGTGCG CGGCGAGGCG GTCAACACGG CCACGACGTA CGGCTACGAC
TCGGTGACGA TGATGCAGGA AACCAAGACG ACGGTCTGCC AGATCGAGCG TTTTGCCTAA
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| Protein sequence | MLLTRKPAAQ DAKTGQASRP GAATLSGSLA RGLAGALPTM DRRTFLKRSG IGVGAGLAAS
QLSLVKKATV VGEARAAEGK DDIVVRRTVC SHCSVGCAVD AVVQNGVWVR QEPVFDSPIN
MGAHCAKGAA LREHGHGEYR LKTPMKLVDG RYQRISWEQA LNEIVARMNA IRQETGPDSF
FFVGSSKHSN EQSYLLRKWV SFFGTNNCDH QARICHSTTV AGVANTWGYG AMTNSYNDMQ
NAKCALYIGS NAAEAHPVSM LHLLHAKETG CKVIVVDPRY TRTAAKSDEY VRIRSGTDIA
FLFGVLHHVF KNGWEDRQFI HDRVYGMDKV RDEVLAKWTP DKVEAVCGVP EAQVRKVAEM
MAMNRPSTLV WCMGQTQHTI GNAIVRASCI VQLALGNIGR PGGGANIFRG HDNVQGATDV
GPNPDSLPGY YGLAAGAWKH YAAVWGVDYD WIKGRFASQA MMEKSGTTVS RWIDAVLEKN
ELIDQDHNVR AMFYWGHAPN SQTRGLEMKR ALDKLDLLVV IDPYPSATAA MANMPAADGT
PPNPNRAVYL LPAATQFETS GSCTASNRSL QWREKVIEPL FESQPDHVIM QALADRLGFG
NELSKRLKVT EYKRAGMTWR EPGTESILRE INRSNWTIGY TGQSPERLQA HMRNMHLFDV
RTLRCQGGKD PVTGYDLTGD YFGLPWPCYG TPELKHPGSP NLYDTSKHVM DGGGNFRANF
GVERDGVNLL AEDGSYSLGA ELTTGYPEFD HVFLKKLGWW DDLTDVEKKA AEGKNWKTDL
SGGIQRVAMK HGCHPFGNAK ARAVVWNFPD PIPQHREPLY STRPDMVAQY PTHDDKKAFW
RLPTLYKTVQ QRNIENKVYE KFPIILTSGR LVEYEGGGEE TRSNPWLAEL QQENFVEINP
KAAADRGIRN NDYVWVKTPT GAQIKVRALV TERVGVDHAF IPFHFSGWWQ GKDLLDYYPE
GAHPIVRGEA VNTATTYGYD SVTMMQETKT TVCQIERFA
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