| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2362 |
|---|
| Symbol | |
|---|
| ID | 1221208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2565244 |
|---|
| End bp | 2565963 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637238762 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_520483 |
|---|
| Protein GI | 17547081 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.170965 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGC GACGCCAACC CGACCTGATC GACCGGCTCG CCGCCGAATA CGCGGTCGGC
ACGCTGCGCG CGGGCGCCCG CCGGCGCTTC GAGCAGCTGA TCCGCCACGA TGCCGACGTG
CGCACGACGG TCGAGCGCTG GCAGCGCTAC CTGGCCGATC TGCCCGCGCT GCAGCCCGCC
TCCGCGCCGC TGCCTGAGAT TCTCTGCCGC GTCGAGGTGC AGCTCGGCTG GCGCCGGCCG
GAACCGCGGC GGCGCACGCG CTGGCAGCAG CTCTGGCACG GGACCGGCTT CTGGCGCGTG
GCTGTGGCGG CGACGGCCAT CGTGGCCGTG GTGGCGATCG GCCTGAACCT GCGGCTGGCG
CGGCAACTGC GCGAAGCCCC CGTCGCCAGC GCGGTGGCCG TGCTGCAGGA CGCACAGGCC
CAGGCCGCCG TGCTGGTCAC CTGGGACGCG CGCACCGGCA CGCTGTCGCT CAAGCGGCTC
GACGCCACGC CGCTGACCAG CCAGCAGGCG CTGCAATTGT GGGCGCTGCC GCCCGACGGG
CACCCGCGAT CGCTTGGCGT GATCGGGCAC CAGCGCGCGA TGCGGCTGAT GCCCGCCCAG
CCGCTGGCGC GAGTGCCGGC GCTCGCGGTG AGCGTGGAGC CGCGCGGCGG CTCGCCCGAC
CCGAACGGGC CAACCGGGCC GGTGATCTTC AAGGGCGCGC TGATCGACAG CGCGCTGTAG
|
|---|
| Protein sequence | MDPRRQPDLI DRLAAEYAVG TLRAGARRRF EQLIRHDADV RTTVERWQRY LADLPALQPA
SAPLPEILCR VEVQLGWRRP EPRRRTRWQQ LWHGTGFWRV AVAATAIVAV VAIGLNLRLA
RQLREAPVAS AVAVLQDAQA QAAVLVTWDA RTGTLSLKRL DATPLTSQQA LQLWALPPDG
HPRSLGVIGH QRAMRLMPAQ PLARVPALAV SVEPRGGSPD PNGPTGPVIF KGALIDSAL
|
|---|
| |