| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2357 |
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| Symbol | hemC |
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| ID | 1221203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2556982 |
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| End bp | 2557986 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637238757 |
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| Product | porphobilinogen deaminase |
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| Protein accession | NP_520478 |
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| Protein GI | 17547076 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.206721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.217288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAA ACGCCCGTCC GACCTCCGTC GAATCCCCTC TGGCAGCCCA GGCGCCGACC
AAGCTGGTCA TCGCCTCGCG CGAAAGCCGG CTCGCCATGT GGCAGGCCGA ATACGTGCGT
GCTGCGTTGC AAAAATACTA TCCCGCGTGC GACGTGTCCA TCCTGGGCAT GACTACGCGC
GGTGACCAGA TTCTCGACCG CTCGCTCGCC AAGGTGGGCG GCAAGGGCCT GTTCGTGAAG
GAGCTCGAGG TCGCGCTCGC CGAGGGCCGC GCCGACCTCG CCGTCCACTC GCTCAAGGAC
GTGCCGATGG AGCTGCCGCC GGGCTTCGTG CTGTCGGCCA TCCTCGAGCG CGAGGATCCG
CGTGATGCCT TTGTCTCCAA TGATTACGCC GATCTCGCCG CGCTGCCCGC GGGCGCGGTG
GTGGGCACCT CCAGCCTGCG CCGCGAGGCG TCGCTGCGGG CGCGCTTTCC GCACCTGGTC
ATCCAGCCGC TGCGCGGCAA TCTCGACACA CGGCTGTCCA AGCTCGACCG CGGCGATTAC
GCGGCCATCA TCCTCGCGGC CGCCGGGCTC AAGCGGCTGG GGCTGTCCGA GCGCATCCGC
GCCGTCATCG CGCCCGAAAC GTCCCTGCCG GCGGCGGGGC AGGGCGCGCT CGGCATCGAG
AGCCGCGTCG ATCGCCACGA CGTGCAGGCC TGGCTCGCGC CGCTGCATCA CGCGCCCACG
GCGCTGGCCG TGACCGCCGA GCGCGCGGTG TCGCGCCAGC TGGGCGGCTC GTGCCAGGTG
CCGCTGGCCG CGTTCGCGCA ATGGACCGAT GCCGGCGCGC TGCGCCTGCG CGCCTTCGTC
GCTTCGCCGG ACGGCCGCCG CAAGCTTGCC GCCGAAGCCG AGGCCACGCC CGCCACACCG
GCCGAGGCCG AGGCCCTGGG CGCCCGCGTC GCGCAGCAGA TGCTGGACGG CGGCGCACAC
GACATCCTCG CCACGCTGGG CGCCGACGCG CCGCCCGCCA CCTGA
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| Protein sequence | MSSNARPTSV ESPLAAQAPT KLVIASRESR LAMWQAEYVR AALQKYYPAC DVSILGMTTR
GDQILDRSLA KVGGKGLFVK ELEVALAEGR ADLAVHSLKD VPMELPPGFV LSAILEREDP
RDAFVSNDYA DLAALPAGAV VGTSSLRREA SLRARFPHLV IQPLRGNLDT RLSKLDRGDY
AAIILAAAGL KRLGLSERIR AVIAPETSLP AAGQGALGIE SRVDRHDVQA WLAPLHHAPT
ALAVTAERAV SRQLGGSCQV PLAAFAQWTD AGALRLRAFV ASPDGRRKLA AEAEATPATP
AEAEALGARV AQQMLDGGAH DILATLGADA PPAT
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