| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2356 |
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| Symbol | |
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| ID | 1221202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2554880 |
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| End bp | 2556967 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637238756 |
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| Product | bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase |
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| Protein accession | NP_520477 |
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| Protein GI | 17547075 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase
[COG2959] Uncharacterized enzyme of heme biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.134951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.286784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACC GCTCGCCTTC TCCATCCAGC GTGCCGCCCG ACGCTCTCCC GCATCCTTCC
GCGCCCGTCG TCATCGTCAC GCGGCCGCGC GCGCAGGCGC CCATGCTGGT TGCCGCGCTG
GAGCGCCACG GGCTGCGCAC GCTGCAGTTT CCGCTGCTCG ACATCGCGCC GACGCCCAAC
CTGGACGACC TGCGTGCTGC GCTGGCCGAT CCGTCGCGCT ATGCGCTGGT GGTGTTCGTC
AGCCCCAATG CCGTGCAGCA GGCGTTTGCG GCCATGCCCG AAGGCTTCCG CTGGCCGCAG
GATGTGCCGG CCGCGGTGGT CGGCCCCGCC AGCGCCCAGG CCCTGGCCGC GCACGGCGTC
GCGGCGCCCA CGTACCGCGT GATCCGGCCC GACTCCCATG CCGACGACGC GCGGCAGGAT
TCCGAGGCGC TGTATGCGCG CCTGGACGTG GCCACGCTGA GCGGCCGCGA AGTGCTGATC
GTGCGCGGCA ACGGCGGCCG CGAATGGCTG GCCGACCGGC TGCGCGAAGC GGGCGTTGCC
GTGCGCACGG TGGAGGCGTA TCGGCGCAGT GTCCCGGTGC CCGACACCGC GGCCTGGGCC
GCGCTGCGCG AGGTGCTGGC CGGCCGCCAC GCCTGGACGC TGACCAGCTC CGAGGCGGCG
CGCAATCTCG ACAGCCTTGC GCGCGCCAGC CTGAGCGCCG CCGAGGTCGA GGCGCTGTAC
GCGGCGCCCT GCTTCGCGCC CCATGCCCGC ATTGTCGAGC AGGCACAGTC GCTGGGCTTT
CGCGACGTGA CGCTGACCGG CGCCGGCGAC GACCGCCTGC TGGCCGGCGT GCTCGCGTGG
GCCGGCCCCG TCGCGCTCGC CGCCGAGACC ACGCCGTCGC CCGCCCCCGT GGCGGCGCCG
GCCGAATCGA ACCCTTCCTC ACCTGCTCCG ACCGTGTCGC AGACTCCCGT TCCCACGTCC
GTTCCCACAC CGGGCCCGGC CGCCGCCTCG CCGGGGCTGG CTCCCGCGCC TGCCGCTCCG
ACCATGACCG CCGGCGCCGG ACCCGGCCGC GGCGGCTGGC TGCTCTGGGC CGCGCTGATC
CTGGCGCTCG TGGTGGTGGC CGGCCTGCAG ATCCGCAATG AGCGGCTGGC GCGCGAGGTC
CGCCAGCGCG CGCAGCAGAA CGAGACGCTG GCGCAGGAGA TGCGCGTGCT GTCGCGCAAC
AATCAGGACG CCTTTGCCCA GCTGCAGCAG AAATTCGGCG CGCTGGACGC CCGCACCGCC
GAAACGCGCG ACCGCCAGGG TGCGCTCGAG CAGGCCAGCC AGGACCTGCT GCGCAACCGC
GACGATTGGC AGCGGGCCGA GATCGAGCGC TCGCTCGAAG TCGCTTCCGA ACAATTGCAG
CTCACCGGCA ACGTGAGCGG CGCGCTGGCC ACACTGCAGA CCATCGACGC TCGCCTGGCC
ACCGTCGACA AGCCGCAGTT CCGCGCCATG CGACGCGCTG TCGCTCGCGA CATCGCCAAG
CTCAAGGCCA TGCCCGCCGT CGACCTGTCG GGCGCCGCGA TCCGGCTGGA CGATGCGATC
AACGGCATCG ATGCGCTGCC GCTGGTGTCG TCCGCCGCGC CGCTGGAGTC GGGGCAGGCC
GCACCGGCCT CGCGGGGCCG TCCCGCCAAG CCGGGCAAGG GCGCGGCGCC GGCTTCGGCG
TTCGCGGCGT CGCCGGCGGC GGAGTCCGGC TGGTCGGCCG GCGTGCGCGC CTGGTGGAGC
CGCCTGTGGC ATGACGTGCG CAGCGAGCTG GGCCAGATCG TGCAGGTACG CCGCGTCGAC
CAGACCGATG CGCTGCTGCT GTCGTCCGAT CAGGCGTGGT TCCTGCGCGA GAACCTCAAG
CTGTGGCTGA TGAACGCGCG GCTGGCGCTG CTGTCGCGCA ACGAGGCCGT GTTCCGCGCC
GACCTCGGCC GCGCCGATAC GCTGCTCGCG CGCTACTTCG ACACGCAGTC GCCGCGCGTG
GTGGCGGAGC AGACCCTGCT GCAGCAGGCG CGCGCGAGCG TCGGCGCGCT GGAGGTGCCG
ACCCTGGGCG ACAGTCTCGC CGCCGCCCGC GGCCAGGGCA AGGAGTAA
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| Protein sequence | MDDRSPSPSS VPPDALPHPS APVVIVTRPR AQAPMLVAAL ERHGLRTLQF PLLDIAPTPN
LDDLRAALAD PSRYALVVFV SPNAVQQAFA AMPEGFRWPQ DVPAAVVGPA SAQALAAHGV
AAPTYRVIRP DSHADDARQD SEALYARLDV ATLSGREVLI VRGNGGREWL ADRLREAGVA
VRTVEAYRRS VPVPDTAAWA ALREVLAGRH AWTLTSSEAA RNLDSLARAS LSAAEVEALY
AAPCFAPHAR IVEQAQSLGF RDVTLTGAGD DRLLAGVLAW AGPVALAAET TPSPAPVAAP
AESNPSSPAP TVSQTPVPTS VPTPGPAAAS PGLAPAPAAP TMTAGAGPGR GGWLLWAALI
LALVVVAGLQ IRNERLAREV RQRAQQNETL AQEMRVLSRN NQDAFAQLQQ KFGALDARTA
ETRDRQGALE QASQDLLRNR DDWQRAEIER SLEVASEQLQ LTGNVSGALA TLQTIDARLA
TVDKPQFRAM RRAVARDIAK LKAMPAVDLS GAAIRLDDAI NGIDALPLVS SAAPLESGQA
APASRGRPAK PGKGAAPASA FAASPAAESG WSAGVRAWWS RLWHDVRSEL GQIVQVRRVD
QTDALLLSSD QAWFLRENLK LWLMNARLAL LSRNEAVFRA DLGRADTLLA RYFDTQSPRV
VAEQTLLQQA RASVGALEVP TLGDSLAAAR GQGKE
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