Gene RSc2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2354 
Symbol 
ID1221200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2553115 
End bp2553642 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content71% 
IMG OID637238754 
Productputative transmembrane hydrogenase cytochrome B- type subunit 
Protein accessionNP_520475 
Protein GI17547073 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.678128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGT CCGAAGCGTC CGTCCCGGTG TGGGACAAGG TCGTCCGCCT CACGCACTGG 
GGCGTGGCGG CCCTGGTGCT GTGGGAACTG TACGAGGATT CCGGCGGTCC GCTGCACCGC
GGCCTCGGCT ATGCGGCGGT GGCGCTGGTG GCGGTGCGCC TGGCGTGGGG CTGGATCGGC
AGCGAGGCGG CACGGTTCCG GACCTGGGCG CCCCGCCCGG CCGAGGTGGT CCGGTATGTC
AAGGCGCTCT GCGCCGGCAG GGCGCCGCGC CATCTCAGCC ACAACCCGGC CGGCGCCGTG
GTGATGTTCG CCATGTGGAC GCTCATCCTC GCGCTGGGCG CAACGGGATG GCTGTCCCGG
CTGGACGCCT TCTGGGGCGA AGACTGGCCC ACGGACCTGC ATGGCCTGCT GGCCGATGCG
CTGGCCGTGC TGATCGTGAT CCACGTGGCG GCGGCCTTTG CGATGAGCGT GCTCCACAGG
GAAAACCTCA TCCGCGCGAT GCTCACCGGC AGGAAGCGCC GCGACTGA
 
Protein sequence
MTSSEASVPV WDKVVRLTHW GVAALVLWEL YEDSGGPLHR GLGYAAVALV AVRLAWGWIG 
SEAARFRTWA PRPAEVVRYV KALCAGRAPR HLSHNPAGAV VMFAMWTLIL ALGATGWLSR
LDAFWGEDWP TDLHGLLADA LAVLIVIHVA AAFAMSVLHR ENLIRAMLTG RKRRD