Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2354 |
Symbol | |
ID | 1221200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2553115 |
End bp | 2553642 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637238754 |
Product | putative transmembrane hydrogenase cytochrome B- type subunit |
Protein accession | NP_520475 |
Protein GI | 17547073 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.678128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCGT CCGAAGCGTC CGTCCCGGTG TGGGACAAGG TCGTCCGCCT CACGCACTGG GGCGTGGCGG CCCTGGTGCT GTGGGAACTG TACGAGGATT CCGGCGGTCC GCTGCACCGC GGCCTCGGCT ATGCGGCGGT GGCGCTGGTG GCGGTGCGCC TGGCGTGGGG CTGGATCGGC AGCGAGGCGG CACGGTTCCG GACCTGGGCG CCCCGCCCGG CCGAGGTGGT CCGGTATGTC AAGGCGCTCT GCGCCGGCAG GGCGCCGCGC CATCTCAGCC ACAACCCGGC CGGCGCCGTG GTGATGTTCG CCATGTGGAC GCTCATCCTC GCGCTGGGCG CAACGGGATG GCTGTCCCGG CTGGACGCCT TCTGGGGCGA AGACTGGCCC ACGGACCTGC ATGGCCTGCT GGCCGATGCG CTGGCCGTGC TGATCGTGAT CCACGTGGCG GCGGCCTTTG CGATGAGCGT GCTCCACAGG GAAAACCTCA TCCGCGCGAT GCTCACCGGC AGGAAGCGCC GCGACTGA
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Protein sequence | MTSSEASVPV WDKVVRLTHW GVAALVLWEL YEDSGGPLHR GLGYAAVALV AVRLAWGWIG SEAARFRTWA PRPAEVVRYV KALCAGRAPR HLSHNPAGAV VMFAMWTLIL ALGATGWLSR LDAFWGEDWP TDLHGLLADA LAVLIVIHVA AAFAMSVLHR ENLIRAMLTG RKRRD
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