Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2336 |
Symbol | |
ID | 1221181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2533797 |
End bp | 2534570 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637238735 |
Product | hypothetical protein |
Protein accession | NP_520457 |
Protein GI | 17547055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.192207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCCACT TTTTGTGGAT CACCACCTTG CACCTGCCTT CGCACCTCGC CAAATCACGC CACGGCGTCT TCTACTTCCG CCTGACCTTC CGCACCGGAG GCGTCACCAC CGAGCGGCGG ATATCTTTGC GCACGAAAAA TCCGCAGGAA GCCCGCTTCA AAGCCCTATG CCTCTCAGGG ATAATGGCTG TTCGCAAACA AGAACAGCAA CGGGGCGCGG CCTTGGACTA CCTCAGCACG GCAGGGAATA TTGCAGGCCA GCGGCCCGAT AGCGACTTTC TTCTGAACCT GCTGCACCGC GTAGATCGTC AGCGCTTGGC GGAACTGGCC GGGCTGTCCT TGGAGGCCGT CAACGAGCTT TTGACGCCGA TGGCAGAGCC AGACACCCGC AGGCTGGATA TTGAAATGCC GGGCGGCTTT GCCATTCGCA ACGTCAACAG CGACGAGGAC ATGGGCCGGG CGGTTCATAT CCTCAAGGCG CTGAACCTGT CGCCCGAAGC GCTGGCGGCA CTGATTACCA GCAACCCCAA CCCTGCACAG GCGGCCCCTG TTCCTGCCTC ACCGCCCGCA GCGCCGCAAG CCGACACCAC GGAAGCAGGC GGCACCACCA TTCAGGAAAT GGTGCCGAGG TTCAGGGCCA GCAAGAAGCT TGACCCCCAA CGGCTGAGGC ATTTTTCGGA CGAGCACTTG TCCGTTCTGG CCGCGTTGCT TCAATGCGAT TGGCTTGCCA CCTGGAACGG CCCCCAGAAT CCCCGGACAC AGTCACCCAC TTAA
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Protein sequence | MSHFLWITTL HLPSHLAKSR HGVFYFRLTF RTGGVTTERR ISLRTKNPQE ARFKALCLSG IMAVRKQEQQ RGAALDYLST AGNIAGQRPD SDFLLNLLHR VDRQRLAELA GLSLEAVNEL LTPMAEPDTR RLDIEMPGGF AIRNVNSDED MGRAVHILKA LNLSPEALAA LITSNPNPAQ AAPVPASPPA APQADTTEAG GTTIQEMVPR FRASKKLDPQ RLRHFSDEHL SVLAALLQCD WLATWNGPQN PRTQSPT
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