Gene RSc2336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2336 
Symbol 
ID1221181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2533797 
End bp2534570 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID637238735 
Producthypothetical protein 
Protein accessionNP_520457 
Protein GI17547055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.192207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCACT TTTTGTGGAT CACCACCTTG CACCTGCCTT CGCACCTCGC CAAATCACGC 
CACGGCGTCT TCTACTTCCG CCTGACCTTC CGCACCGGAG GCGTCACCAC CGAGCGGCGG
ATATCTTTGC GCACGAAAAA TCCGCAGGAA GCCCGCTTCA AAGCCCTATG CCTCTCAGGG
ATAATGGCTG TTCGCAAACA AGAACAGCAA CGGGGCGCGG CCTTGGACTA CCTCAGCACG
GCAGGGAATA TTGCAGGCCA GCGGCCCGAT AGCGACTTTC TTCTGAACCT GCTGCACCGC
GTAGATCGTC AGCGCTTGGC GGAACTGGCC GGGCTGTCCT TGGAGGCCGT CAACGAGCTT
TTGACGCCGA TGGCAGAGCC AGACACCCGC AGGCTGGATA TTGAAATGCC GGGCGGCTTT
GCCATTCGCA ACGTCAACAG CGACGAGGAC ATGGGCCGGG CGGTTCATAT CCTCAAGGCG
CTGAACCTGT CGCCCGAAGC GCTGGCGGCA CTGATTACCA GCAACCCCAA CCCTGCACAG
GCGGCCCCTG TTCCTGCCTC ACCGCCCGCA GCGCCGCAAG CCGACACCAC GGAAGCAGGC
GGCACCACCA TTCAGGAAAT GGTGCCGAGG TTCAGGGCCA GCAAGAAGCT TGACCCCCAA
CGGCTGAGGC ATTTTTCGGA CGAGCACTTG TCCGTTCTGG CCGCGTTGCT TCAATGCGAT
TGGCTTGCCA CCTGGAACGG CCCCCAGAAT CCCCGGACAC AGTCACCCAC TTAA
 
Protein sequence
MSHFLWITTL HLPSHLAKSR HGVFYFRLTF RTGGVTTERR ISLRTKNPQE ARFKALCLSG 
IMAVRKQEQQ RGAALDYLST AGNIAGQRPD SDFLLNLLHR VDRQRLAELA GLSLEAVNEL
LTPMAEPDTR RLDIEMPGGF AIRNVNSDED MGRAVHILKA LNLSPEALAA LITSNPNPAQ
AAPVPASPPA APQADTTEAG GTTIQEMVPR FRASKKLDPQ RLRHFSDEHL SVLAALLQCD
WLATWNGPQN PRTQSPT