Gene RSc2331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2331 
SymboltISRso10b 
ID1221176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2530467 
End bp2531354 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content64% 
IMG OID637238730 
ProductISRSO10-transposase ORFB protein 
Protein accessionNP_520452 
Protein GI17547050 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.196819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAGCG CGCTCGCCAT CGTTGCCGGG GGACGACCAG TGAAGCTAGT TTGCGAGGTC 
CTCGGCGTAG CGCGCTCAAA CGTGGCGGCC AAGCGGGCCC GGCCGGGTGA TTGGCGCGAC
GGGCGCACAG CTCGGCAAAC CGACGACGCT AGCTTGGTCG ACGAAATCCG GCGCACCATC
GCCGACTTGC CGAGCTATGG CTACCGGCGG GTCTGGGGCA GATTGCGGCG CGAACGTGAG
CGTCAATGCG AAGCGCCGAT CAATGCCAAG CGTGTCTATC GGGTCATGCG TGTGCACAGC
TTGCTGCTTG AGCGCAGGCC GACGCCACCG CGTCCACCGC GCCGGCATGA CGGCAAGGTC
GCCGTGGCCA AGAGCAACCA GCGCTGGTGC TCCGATGGCT TCGAGTTCCG CTGCGACAAC
GGCGAGCCGC TGCGGGTGAC GTTCGCGCTG GATTGCTGCG ACCGCGAGGC GATGAGCTGG
GTGGCGACGA CCGGCGGCTA CAGCGGCGAC GTAGTACGCG ACGTGATGCT GGCGGCCGTC
GAGCAGCGCT TCGGCAATGT TCCGAAAGCG CCAGCGGAAA TTGAATGGCT GACGGACAAC
GGCTCAGGCT ACATTGCTGG GAAGACTCGC GAGTTCGCCA CGGACATTGG CTTGAAGCCA
TTGACGACAC CGGTTTGCAG CCCGCAGAGC AACGGCATGG CCGAGAGCTT CGTGAAGACG
ATGAAGCGCG ACTACGTCGC CTTCATGCCC AAGCCTGACG CGGCCACAGC GACGCGCAAC
CTCGCCATCG CGTTCGAGCA TTACAACGAG CAGCATCCCC ATAGCGCACT GAAATATCGC
TCGCCACGCG AGTTCAGGCG CAGGACGGAA TCATCAACTC AAGTGTGA
 
Protein sequence
MDSALAIVAG GRPVKLVCEV LGVARSNVAA KRARPGDWRD GRTARQTDDA SLVDEIRRTI 
ADLPSYGYRR VWGRLRRERE RQCEAPINAK RVYRVMRVHS LLLERRPTPP RPPRRHDGKV
AVAKSNQRWC SDGFEFRCDN GEPLRVTFAL DCCDREAMSW VATTGGYSGD VVRDVMLAAV
EQRFGNVPKA PAEIEWLTDN GSGYIAGKTR EFATDIGLKP LTTPVCSPQS NGMAESFVKT
MKRDYVAFMP KPDAATATRN LAIAFEHYNE QHPHSALKYR SPREFRRRTE SSTQV