Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2331 |
Symbol | tISRso10b |
ID | 1221176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2530467 |
End bp | 2531354 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637238730 |
Product | ISRSO10-transposase ORFB protein |
Protein accession | NP_520452 |
Protein GI | 17547050 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.196819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATAGCG CGCTCGCCAT CGTTGCCGGG GGACGACCAG TGAAGCTAGT TTGCGAGGTC CTCGGCGTAG CGCGCTCAAA CGTGGCGGCC AAGCGGGCCC GGCCGGGTGA TTGGCGCGAC GGGCGCACAG CTCGGCAAAC CGACGACGCT AGCTTGGTCG ACGAAATCCG GCGCACCATC GCCGACTTGC CGAGCTATGG CTACCGGCGG GTCTGGGGCA GATTGCGGCG CGAACGTGAG CGTCAATGCG AAGCGCCGAT CAATGCCAAG CGTGTCTATC GGGTCATGCG TGTGCACAGC TTGCTGCTTG AGCGCAGGCC GACGCCACCG CGTCCACCGC GCCGGCATGA CGGCAAGGTC GCCGTGGCCA AGAGCAACCA GCGCTGGTGC TCCGATGGCT TCGAGTTCCG CTGCGACAAC GGCGAGCCGC TGCGGGTGAC GTTCGCGCTG GATTGCTGCG ACCGCGAGGC GATGAGCTGG GTGGCGACGA CCGGCGGCTA CAGCGGCGAC GTAGTACGCG ACGTGATGCT GGCGGCCGTC GAGCAGCGCT TCGGCAATGT TCCGAAAGCG CCAGCGGAAA TTGAATGGCT GACGGACAAC GGCTCAGGCT ACATTGCTGG GAAGACTCGC GAGTTCGCCA CGGACATTGG CTTGAAGCCA TTGACGACAC CGGTTTGCAG CCCGCAGAGC AACGGCATGG CCGAGAGCTT CGTGAAGACG ATGAAGCGCG ACTACGTCGC CTTCATGCCC AAGCCTGACG CGGCCACAGC GACGCGCAAC CTCGCCATCG CGTTCGAGCA TTACAACGAG CAGCATCCCC ATAGCGCACT GAAATATCGC TCGCCACGCG AGTTCAGGCG CAGGACGGAA TCATCAACTC AAGTGTGA
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Protein sequence | MDSALAIVAG GRPVKLVCEV LGVARSNVAA KRARPGDWRD GRTARQTDDA SLVDEIRRTI ADLPSYGYRR VWGRLRRERE RQCEAPINAK RVYRVMRVHS LLLERRPTPP RPPRRHDGKV AVAKSNQRWC SDGFEFRCDN GEPLRVTFAL DCCDREAMSW VATTGGYSGD VVRDVMLAAV EQRFGNVPKA PAEIEWLTDN GSGYIAGKTR EFATDIGLKP LTTPVCSPQS NGMAESFVKT MKRDYVAFMP KPDAATATRN LAIAFEHYNE QHPHSALKYR SPREFRRRTE SSTQV
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