Gene RSc2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2325 
Symbol 
ID1221170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2525430 
End bp2525927 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content64% 
IMG OID637238724 
Producttranscription regulator protein 
Protein accessionNP_520446 
Protein GI17547044 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.23825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCG CCGCACAGGC TGTCGAACAA TGGAACCGCG AGCGCCCGGA CCTCGATGTC 
AGCTCAATGC TGCTGCTCGG GCGTCTGGGG GAAGCAGCGC TTGTCATTGC ACGTGAACGC
CTGAACCCGC TGTTTGCGGA GTACGGCCTG CAGCCTGGCG AGTTCGACGT GCTCGCTACC
CTGCGCCGCT GCGGCGCACC GTACGCGCTC ACGCCCACCG CGCTGTACGA CGCGGCGATG
ATGTCCTCGG GTGGCATGAC CAACCGCATC GACCGTCTGC AACAGGCCGG CTGGGTGGAG
CGCCGCCCCA ATCCTGAAGA TGGACGCGGC ACCTTGGTCG CCCTGACCAA TGCGGGTTTT
GCGCTGATTG ACGAAGCCGT CAGCGCGCAT GTCAAGAACC AGCGTGCCGT GTTGTCGGTG
CTAACGGAAG TGGAGCAGCG GCAGTTGGCG AAGTTGCTGG CGAAGTTGAT CGAGGGACAG
CGAGAGGAGG AAAACTAG
 
Protein sequence
MDRAAQAVEQ WNRERPDLDV SSMLLLGRLG EAALVIARER LNPLFAEYGL QPGEFDVLAT 
LRRCGAPYAL TPTALYDAAM MSSGGMTNRI DRLQQAGWVE RRPNPEDGRG TLVALTNAGF
ALIDEAVSAH VKNQRAVLSV LTEVEQRQLA KLLAKLIEGQ REEEN