| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2324 |
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| Symbol | |
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| ID | 1221169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2523838 |
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| End bp | 2525265 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238723 |
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| Product | putative transport transmembrane protein |
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| Protein accession | NP_520445 |
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| Protein GI | 17547043 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.202305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAA CCTCGATCAC CGCAGACGAC GCCTCCTGGC TCGATCTGTT TCGCGGTGCC
AACGCGCTGC GCGTGCTGGT GCTGGCCGCA GGCGTGGCGC TGCACGCCAT CAACCTCTAC
CTGACCACGA CGATCCTGCC GAGCGTGGTC GACGACATCG GCGGCGTGGC GTTCTATGCG
TGGAATACGA CGCTGTTCAT CGTCGCGTCG ATCACCGGGG CTGCCGTGGC GGCGCAGGTG
ATCCAGCATC TCGGGCCGCG CGGCGCCTAC CTGCTGGGCG CCATGGTGTT CGGCGGCGGC
TCGGCGCTGT GTGCACTGGC ACCGATCATG CAGGTACTGC TGGTGGGCCG CGTGCTGCAG
GGGTTGGGCG GGGGCGTGCT GCTGTCGGCG CCGTATGTGC TGATGCGCAG CGTGCTGCCC
GAACCCCTGT GGCCGCGTGC GCTGGCGCTG CTCTCGGGCA TGTGGGGCAT TGCGACATTG
CTCGGGCCGG CTGTGGGCGG CATCTTTGCG CAGTACGCGA CGTGGCGGCT GGCGTTCTGG
TCGCTGGTCG TGCTGATTGC GCTGGCGGCG GCTGCAGCCG TGGTCGTGCT GAAACCGGCA
GCCCCCCAGG CAGAACGTCC GACGCCGGTG CCGACGCGCC AGCTCGTGCT TCTCGCGGTT
GCCGTGGTGG CAGCGTCGTG GGCCAGCGTC AGCGACTCGC CGTGGCTGGG CGCACTCGGC
TTGATCGCGG CCGCTCTCAC ACTGCTGGCA ATCCGTCGTG TGGAGATGCG CTCATCACGC
CGCATCCTGC CCGCCGATGC GTACACGGGC CGCACGGCGC TCGCCGCGCT GTATGGCGTG
TCTGCGCTGC TGGCCGTTAC GGTCACGTGC ACGGAGATTT TCGTGCCGCT GTTCCTGCAA
CGGCTGCATG GGCAGAGCCC GCTGATTGCC GGCTACATCG CGGCCACGGC GTCGGCCGGC
TGGACGCTCG GCGCCATCCT GAGCGCTGCG CTGCGCGCGG CGTCGGTCAC ACGCGCGATC
CGCTTGGCAC CGTGGGCGTG CGCGCTGGGC TTGCTGGTAC TGGCGATGCT GGTGCCGATA
GGCGCGGGCA GCGCGTGGAT GACCACGCTG ATCATCGTCG CGCTCACGCT GGTGGGACTG
GGCGTGGGCG TTGTGTGGCC GCACCTGGGC AACCGCATCA TGACGGCGGC GCCGGCGGAA
GACCATGACC GCGCATCGGC GTCGATCGTG ACGGTGCAGT TGGTGGCGAC GGCGTTGGGG
GCAGCGCTGG GTGGGGTGGT GCTCAACACG TTGGGCGCGG CGGGCCCGGC GCCTGATCTG
GGAGCAGCGT CGCGCTGGCT GTTCCTGCTG TTTGCGGTGG CGCCGGTGGG GGCGCTGGTG
ATTGCGCACA CGGGGCTCCG CACCCGGCTC ACCTCTTCGA CACGCTAG
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| Protein sequence | MSSTSITADD ASWLDLFRGA NALRVLVLAA GVALHAINLY LTTTILPSVV DDIGGVAFYA
WNTTLFIVAS ITGAAVAAQV IQHLGPRGAY LLGAMVFGGG SALCALAPIM QVLLVGRVLQ
GLGGGVLLSA PYVLMRSVLP EPLWPRALAL LSGMWGIATL LGPAVGGIFA QYATWRLAFW
SLVVLIALAA AAAVVVLKPA APQAERPTPV PTRQLVLLAV AVVAASWASV SDSPWLGALG
LIAAALTLLA IRRVEMRSSR RILPADAYTG RTALAALYGV SALLAVTVTC TEIFVPLFLQ
RLHGQSPLIA GYIAATASAG WTLGAILSAA LRAASVTRAI RLAPWACALG LLVLAMLVPI
GAGSAWMTTL IIVALTLVGL GVGVVWPHLG NRIMTAAPAE DHDRASASIV TVQLVATALG
AALGGVVLNT LGAAGPAPDL GAASRWLFLL FAVAPVGALV IAHTGLRTRL TSSTR
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