| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2316 |
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| Symbol | |
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| ID | 1221161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2516418 |
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| End bp | 2517617 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238715 |
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| Product | putative drug transport transmembrane protein |
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| Protein accession | NP_520437 |
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| Protein GI | 17547035 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.729418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACT CAAGACTCAA TCCTGACGTT CTGCGTCTGG CCTCCTCACA AGCGCTGGCC
GGTGCCAACT CGACGGTCAT CTTTGCGACC GGCGCCATCA TCGGCCACAT GCTTGCGCCA
AGTCCGGCCC TGGCCACCGT GCCGGTCTCC ATCTTTGTCG TGGGGATGGC CGCCGCGACG
CTTCCCGTTG GCGTGGTGAC CCGGCGCTAC GGCCGGAAAA CCTCTGCCCT GTTCGGTAGC
GTATGCGGCG TGACTGTCGG CCTGCTGGCG GCGCTGGCGC TTGTGATCCA GTCGTTCAGC
CTGTTCTGCG TCGCCATGCT GTTTGGTGGT GCGTATGCGG CGGTCGTGCT GACGTACCGC
TTCGCGGCCG CCGAATGCGT GCCGGCAGAG CATCGCGCGC GGGCCATGTC CACCGTGCTG
GCCGGGGGTG TTGCGGCGGG CGTGCTCGGG CCGCAGTTGG TGACGGCCAC CATGAATCTA
TGGTCGCCGC ACGCGTATGC GGTCACCTAC CTCGCCTCTG CTGGTACGGC CGTGCTCTCG
GCCATCGTGC TGCAGGGCGT GCGGTTCGAG CACCAGCCGC CAGTCTCGGC CCACGCGCAT
GGGCGGCCGA GTTCCGACAT CATGCGGCAG CCACGCTTTG TTGTGGCAAT GCTCTGCGGT
GTCGTGAGCT ACATGATGAT GAACTTCATG ATGACCTCCG CACCGCTGGC CATGGAGCTA
TGTGGCATCC CGCGTGTGCA TGCCAACTAC GGCATCGAAA TCCACGTCAT CGCCATGTAT
GCGCCGAGCT TTTTCACGGG GCGGTTGATC GCGCGCTTCG GTGCGCCACG CGTGAGCCTG
GCGGGGCTGG CGTTGATCGC CTTAGCGGCC ACGACGGGCA TGACCGGCGT GTCAGTGAAT
CACTTCTGGG TCGCGCTGCT GCTGCTCGGT TTGGGCTGGA ATTTCGGCTT CCTGGGTGCC
TCGGCCACGG TGCTGACGTG CCACACCCCG GCGGAAGGCC CTCGCGTGCA GTCCATCTAC
GACTTTGTCG TGTTTGGGGC CATGGTTGTC GGCTCGTTCG TATCGGGCGG CTTGCTGGCA
ACCTACGGAT GGCCGCTGGT TTGTGGCCTG ATCCTGCCTC CAGTGCTAGT GGCGGCGGTC
AGCCTTTTCT GGCTGCGGCG AGTCCACGTG CCAACCGACC CACTGGCACA GCGCGGTTAA
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| Protein sequence | MFNSRLNPDV LRLASSQALA GANSTVIFAT GAIIGHMLAP SPALATVPVS IFVVGMAAAT
LPVGVVTRRY GRKTSALFGS VCGVTVGLLA ALALVIQSFS LFCVAMLFGG AYAAVVLTYR
FAAAECVPAE HRARAMSTVL AGGVAAGVLG PQLVTATMNL WSPHAYAVTY LASAGTAVLS
AIVLQGVRFE HQPPVSAHAH GRPSSDIMRQ PRFVVAMLCG VVSYMMMNFM MTSAPLAMEL
CGIPRVHANY GIEIHVIAMY APSFFTGRLI ARFGAPRVSL AGLALIALAA TTGMTGVSVN
HFWVALLLLG LGWNFGFLGA SATVLTCHTP AEGPRVQSIY DFVVFGAMVV GSFVSGGLLA
TYGWPLVCGL ILPPVLVAAV SLFWLRRVHV PTDPLAQRG
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