| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2308 |
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| Symbol | |
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| ID | 1221153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2507850 |
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| End bp | 2509553 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238707 |
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| Product | putative GSPE-related protein |
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| Protein accession | NP_520429 |
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| Protein GI | 17547027 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.173672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGA ACTGCGCAAC CCCCGACTCG CGCGGCACCC TGTACCGCGA TGCCTTGCGC
GAACTCGGCG AGCGCTACGG CTCGGGCATC CGGGCGCTGG AGGCACTGCC GGCGCATGTC
GATGCCGACG CCGATACGGT GCTGGCGCTG CTTGCGCAGG CGTTCCGGAT GACGCCCATC
GGCATCCGCG AGATGCATGG GCTCGAGCCG GATTTCAGCG TGATGCCGTT CGTCGAGGCC
ACCGCGCGGC TGTGCATGGG CTTCCGCGAC GGGGCGGGCC TGCTGTTCGT GATCGCCGAT
CCGCTCGACG CCCGCATCCG CGGCTGCATC GACCAGCGCA TGCGCGCGCG CCCCACCGTG
CCGTACCGGT GGTCGCTCGC GAGCGTCGGC GATCTGAATG CCTATCTTGC CGCCCGCGAA
AAGGATGTGC GGGCGATGGA CACGCTCGCG ATGGACGGCG CCGTGCGGGG CGCCAGCGAG
ACGGCCGCGC TGGCCCTGAC GCTGCAAGGC ATCAGCCATG ACGACAGCCC GATCGTCCGG
CTGCTCAATT CCACCATCTA CGACGCGCTG AAACTGCAGG CGAGCGACAT TCACCTGGAG
TGCCGTGCCG GCGGGCTGAC CATCAAGTAC CGGATCGATG GCGTCCTGAA TGTCGTCAGC
CGGATGGAGG GGCGTGAGCT TGCCGACCAG GTGCTGTCCC GGCTGAAGGT GATTTCCGAG
CTCGACATCG CCGAGCGGCG GGTGCCGCAG GACGGGCGCT TCAAGGCGCA ATACGCGGCG
CGCGACATCG ACTTTCGGGT GTCGATCATG CCCAACCAGT TCGGCGAGGA TGCGGTCTTG
CGGATCCTGG ACCGGTACCA GCTCTCGCAG GCCGCCGGCG GGCTCACGCT CGAAGCGCTC
GGGTTCCAGG CGGGCGACAT GTCGTTCATG CGCACGGTCG CGGCCATGCC CTATGGGATG
CTGCTGGTGA CCGGCCCGAC TGGCAGCGGC AAGACGACCA CGCTGTACGC CATTCTCACC
GAGATCAACG ACGGCCTCGA GAAGATCGTC ACGATCGAGG ATCCGGTCGA GTACCAGCTG
GGCGACATCC TGCAGATTCC CGTCAACGAA GCGAAGGGGC TGACGTTCGC GCGCGGCCTG
CGGTCGATCC TGCGGCACGA TCCCGACAAG ATCATGGTCG GCGAGATCCG CGACAGCGAG
ACCGCGCAGA TCGCGGTGCA GGCCGCGCTG ACCGGCCACC AGGTCTTCAC GACCGTGCAC
GCGAACAATG TGTTCGACGT GATCGGGCGT TTCACCAACA TGGGGGTCGA TTCGTACAGC
TTTGTTTCGG CGCTGAACGG CGTGATCGCG CAGCGCCTGC TGCGCCGTTG CTGCCCGGAT
TGCGCGACGC AGGAGCGGTA TGCGCCGGAG CTGCTCGCGC GCGCCGGCAT CGAGCCCGAT
GCGGCGCAGG ATTTCCACTT TCGGCGCGGC ATCGGCTGCG CGGCGTGCCG CGGCACCGGC
TATCGCGGCC GCCGCGCCAT CGCAGAGGCG CTGCGCATGA ATGATGAACT GCGGCAACTG
CTGTCCGAGC GCGCGCCGAT CGGGCAGATC AAGCAGGCGG CGATGCGCAG CGGCATGACG
ACGCTGCGCA CCGCGGCGGT CAAGCTGGTT GCCGCGGGCG AAACCACGCT TGAGGAGATC
AACCGTGTCA CGCTTGTCGA CTGA
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| Protein sequence | MDTNCATPDS RGTLYRDALR ELGERYGSGI RALEALPAHV DADADTVLAL LAQAFRMTPI
GIREMHGLEP DFSVMPFVEA TARLCMGFRD GAGLLFVIAD PLDARIRGCI DQRMRARPTV
PYRWSLASVG DLNAYLAARE KDVRAMDTLA MDGAVRGASE TAALALTLQG ISHDDSPIVR
LLNSTIYDAL KLQASDIHLE CRAGGLTIKY RIDGVLNVVS RMEGRELADQ VLSRLKVISE
LDIAERRVPQ DGRFKAQYAA RDIDFRVSIM PNQFGEDAVL RILDRYQLSQ AAGGLTLEAL
GFQAGDMSFM RTVAAMPYGM LLVTGPTGSG KTTTLYAILT EINDGLEKIV TIEDPVEYQL
GDILQIPVNE AKGLTFARGL RSILRHDPDK IMVGEIRDSE TAQIAVQAAL TGHQVFTTVH
ANNVFDVIGR FTNMGVDSYS FVSALNGVIA QRLLRRCCPD CATQERYAPE LLARAGIEPD
AAQDFHFRRG IGCAACRGTG YRGRRAIAEA LRMNDELRQL LSERAPIGQI KQAAMRSGMT
TLRTAAVKLV AAGETTLEEI NRVTLVD
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