| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2291 |
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| Symbol | |
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| ID | 1221136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2484549 |
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| End bp | 2485145 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238690 |
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| Product | putative transglycosylase protein |
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| Protein accession | NP_520412 |
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| Protein GI | 17547010 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.128594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCATCG CGGGCATGGC GGGTGCGCCG TCGGTGAGCG CGCAGATTTT CGGTGCGGTG
CAATCGGACG GCACGGTGGT CCTGACGAAC CTGCAGAGCG GCCCGCACAG CCCGACGTTT
CGCGTCATCG TCGCCGCGCG CCGCGGGCCG GCCCAGCCGC TTGCCGAGAA CGCGCGCGCG
GCGGTCGTCG CGGTCGACAC AACGCGCTTC AGCGACATCA TTGCCGAAGC CGGCCGCAAG
TGGAATGTGG AACCCGAGCT GCTGCGGGCC ATCATCGCGG TCGAATCGAA ATTCAACCCC
CGCGCCGTGT CGAAGCGCGG CGCGCGCGGT CTCATGCAGC TGATGCCCGG GACTGCCCGG
CGCTTTACGG CGGGCGACCT GTTCGATCCG CGCGCGAACG TGCTGGCCGG CGCGCAGTAT
CTGCGCTTCC TGCTCGACCT GTTCGGCAAC GATGTCGAGC TGGCGGTGGC GGCCTACAAC
GCGGGCGAGA ACGCGGTGAT CCGGGCCGGC TACCGGATCC CGGCGCTCGC GGAGACGCGG
TCCTACGTGC CGGCTGTGAT GGCGCGTTAC CGGCGCCTGT CGGCGTCCAC CCTGTAG
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| Protein sequence | MLIAGMAGAP SVSAQIFGAV QSDGTVVLTN LQSGPHSPTF RVIVAARRGP AQPLAENARA
AVVAVDTTRF SDIIAEAGRK WNVEPELLRA IIAVESKFNP RAVSKRGARG LMQLMPGTAR
RFTAGDLFDP RANVLAGAQY LRFLLDLFGN DVELAVAAYN AGENAVIRAG YRIPALAETR
SYVPAVMARY RRLSASTL
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