| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2288 |
|---|
| Symbol | |
|---|
| ID | 1221133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2481316 |
|---|
| End bp | 2482377 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637238687 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_520409 |
|---|
| Protein GI | 17547007 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.176643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC GACCGAATAC CCTCAAGCGA GCGGCGCTGC TGGCCGGCGT CACCAGCCTG
CTCGCGCCAC TCGGGGCACA TGCCTGCGCC ACCTGCGGCT GTTCGCTCAG CACCGATGCC
GCCATGGGCT ACTCCGCCAT CCCGGGCTGG CGCATCAGCC TGGACTACAC CTACATCCCG
CAGAACCAGC TGCGCCACGG CACGGGTTCG GTCGCGGCGG CGGAGGTGGC GGGCATCAAC
GCGGCCGGCG GCAACCAGGA GGTCGAGCGC CAGACCATCA ACCGTTATGT CAACCTCGGC
GTCCACTACA GCCCGAACAG CAGTTGGAAC TTCAGCGTGA TCGTGCCCTA CGTGGATCGC
GGGCACACTA CCTATGGTTC GGCCACGCCC GATCAGCTCA CCCCGGACAA CGTCAGCGGC
GCGACGGCCA GCGGCCTGGG CGACATCAAG CTGATCGCCA GCTACCAGGG TTTTCTGCCC
ACCCACAACC TGGGCGTGCA GTTGGGCGTC AAGCTGCCGA CCGGCCGCTA CGGCGGCCAG
AACGTGCTGA CCGGCGCCAC GGTTGGGCGC AATCCGGTGC TCTTCTCCAG CGGCCCCAAT
GCCGCCGCGG GGCAGGCCCT GGATACCAGC CTGCAGCCCG GCACCGGCAC CACCGACCTG
ATCCTGGGCG CCTACTACTA CCAGCCCGTC AGCCAGGATT TCGATGCGTT CATCAATGGC
CAGGTCCAGT CCGCCGTGCG GCAGAACCTG CGCGACGCGG GCGCCGACTT CCGCCCCGGC
AATACCGCCA CGATGAGCTT CGGCCTGCGC TACGAAGCGG ATCCGCATAT CGTGCCGCAG
CTGCAGTTCA ACGTGACGCG CAAGAACGCC GACAAGGGCG CGCTGGCCGA TACCGCCAAC
ACGGCCGGCA CGGTGGTCTA CCTGTCGCCG GGCGTGACGG TGAGCGTGAT GCACAACCTT
CAGGTCTATG CGTTCCTGCA GAAGGCGGTG TACAGCAATC TGCAGGGCTA TCAACTTTTC
CCGCGCTGGT CGGGTACCGT CGGAGCCAGC TATGCGTTCT GA
|
|---|
| Protein sequence | MTTRPNTLKR AALLAGVTSL LAPLGAHACA TCGCSLSTDA AMGYSAIPGW RISLDYTYIP
QNQLRHGTGS VAAAEVAGIN AAGGNQEVER QTINRYVNLG VHYSPNSSWN FSVIVPYVDR
GHTTYGSATP DQLTPDNVSG ATASGLGDIK LIASYQGFLP THNLGVQLGV KLPTGRYGGQ
NVLTGATVGR NPVLFSSGPN AAAGQALDTS LQPGTGTTDL ILGAYYYQPV SQDFDAFING
QVQSAVRQNL RDAGADFRPG NTATMSFGLR YEADPHIVPQ LQFNVTRKNA DKGALADTAN
TAGTVVYLSP GVTVSVMHNL QVYAFLQKAV YSNLQGYQLF PRWSGTVGAS YAF
|
|---|
| |