Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2285 |
Symbol | |
ID | 1221130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2478916 |
End bp | 2479347 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238684 |
Product | putative signal peptide protein |
Protein accession | NP_520406 |
Protein GI | 17547004 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.685879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCGA TCGCATGTCT CTTCGCCGCC TTCGCCGCCC TGCCGGTGCT CGCGCATGCC CAGACCGTTC AGATGCCCGA CGTCCTGGCC GCCGAGCATG CGCTGTCCCT CGGCAAGCCG GTGACCGCCA CCATCGACCT GACCCGTTGC ACCGGCGACA CCGCCACCAC CCCGGCAGGC ACGACGCGCG GCGGCGTGAC CGTGAATCCG TACCGGATCC AGCCGGACAA CACCCTGAGC TTCTCCGACA CGCACTTCAC CGTGCGCAGC GACGGCACGC CGATCACGCA ATTCCTGCGC TACTCCATCG ACACCAGCGG CACGGCGCGC TTTTCGTCGT ACATCTTCGC CATGCCGGCC TACACGCTGC AGAGCCAGGT GTCCTACACC TGCAAGCTGG GCGAGGGCGT GAAGCTGTTC GCCCGGTTCT GA
|
Protein sequence | MKPIACLFAA FAALPVLAHA QTVQMPDVLA AEHALSLGKP VTATIDLTRC TGDTATTPAG TTRGGVTVNP YRIQPDNTLS FSDTHFTVRS DGTPITQFLR YSIDTSGTAR FSSYIFAMPA YTLQSQVSYT CKLGEGVKLF ARF
|
| |