| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2276 |
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| Symbol | |
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| ID | 1221121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2469810 |
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| End bp | 2472656 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238675 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_520397 |
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| Protein GI | 17546995 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3868] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.806007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.316994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGAAT GGCTGGCAGC GCTGTGCGCG GCCGTGGTCG TTGCCATGCC TTGCGGGGCG
CCGGCCCAAC AGGCGCCGGA TGCGGCGACT GGCGAGGGTG CTCTGCCCGC GCAAGCCGCC
ACCGCAGAGG CGCCGAACAT TGCCTGGTTT TACGGCGACA AGCCCCCCGT GGCGCAGCTA
CGCGCCTTCG ATGCGGTCGT GGTCGAGCCC GACCACGGCT TCGATCCGTC ACGCGCCAGG
ACGCCCGCGA CGCAATGGTT CGCCTACGTG AGCGTAGGCG AGGTCGCGCC CGGGCGCCGC
TGGTATCAGG CGCTGCCCAA GGCCTGGCTG GCCGGCAGCA ACGCGGCGTG GGCCTCGCGC
GTGATCGACC AGTCCCAGCC GCAGTGGCCC GACTTCTACG TCGACCACGT CATCGCGCCG
CTGTGGGACA AGGGCTATCG CGGCTTCTTC CTCGATACCC TCGATTCATA CCAGCTCGTC
GCCAAGGACG CCGCCGCGCG GGCAGCGCAG GAGGCCGGCA TGATCCGGGT GATCCGGGCC
ATCAAGGCAC GCTATCCGGA GGCGAAGCTG ATCTTCAACC GCGGCTTCGA GATCCTGCCG
CAGGTGCATG ACCTGGTCTA CGCGGTGGCG TTCGAGTCGC TGTACCGCAG CTGGGACCAG
GGCAGCAAGC AGTACCGCGA AGTCAACGAT GCCGACCGCG CGTGGCTGAT GGGCCAGGCG
CGCAGGATCC GCGACGAATA CCGCCTGCCC GTCATCTCCA TCGACTACTG TCCGCCCGCC
GATCGCGCCT GCGCGCGCGA GACCGCCAGG CGCATCGAGG CGCAGGGGCT GATTCCCTAT
GTGACCGATC CGGCGCTGTC GACGATCGGG GTCGGGCGCA TCGAGGTGCT GCCGCGCAAG
GTGCTGATCC TGCAGGACCG CGCCCCGAAC ACCGATATCG ACACCAGCGA AGGCGTGCGC
TTTCTCGCCA TGCCGCTCAA CTTCCTCGGC TACGACGTCG AGTACGCCGA CCTCGGCCAG
CCGCTGCCGG CCGAGGTGCC GCCCGACCGC TATGCCGGCG TGGTGGTGTG GATCAACTCC
GGTCCGGTCA GGCAGGTGGC GGCGCTGTCG TCGTGGGTGC GGCAGCGCAT TCACGACGGC
GTGCGCATTG CCTTCATGAA CGAGCTCGGC CTGCCGGCGG ACGGCAGCTT GACCGACATG
CTCGGGCTGC AGCTGGTGCG CGGCCATGCC ACCGGGCCGC TGTCGGTGGT GTCGCAGGAC
CGGATCGTCG GCTTCGAAAT GGCGCCCCGG CCCGACCGGC GTGCCGCGCA GCCGATCCGG
GTGGGCGCGG ATGGGCAGTC GCTGCTGCGC CTGAAGTCGG GCGATTTCGA GTTCGATGCC
GCCGCCATCA CACCGTGGGG CGGCTACGTG CTCAACCCGT ACGCGGTGTT TTCGCTGGGC
ACGATCGAGC AGTCGCGCTG GGTGATCCAG CCGCTGGCGT TCCTGCGCCG GGCGCTGGCG
CTGCCGGACA TGCCGATCCC GGATGTGACG AGCGAGAACG GCCGGCGCCT GATGCTGGTC
CATGTGGACG GCGACGGCTT CGCCTCGCGC GCTGAATTTC CCGGCCCCGA ATATTCCGGC
GAAGTGCTGA TGCAGGAGGT CTGGGAGCGC TACGGCATTC CGACCACGCT GTCGGTCATC
GAGGGCGAGG TGGGGCCGAG CGGCCTGTAT CCCAAGCTCA CGCCGCGCCT GGAGGCGATT
GCCCGGAAGA TGTTCGCGCT GCCCTATGTC GAGCTCGGCA CGCACACCTA TTCGCACCCC
TTCAAGTGGG GCCGCACGGT GCCGGGCGCG CCCGCCCAGG CCGGGGGGGG CGATTCCGCC
TTCGCGCTGA CCATTCCGGG CTACAAATTC AGCCTGGAGC GGGAGATCGG CGGCTCCATC
CGCTACATCA ACGCGAGGCT GGCGCCGCCG GACAAGCGGG TCCGGATCGT GCAATGGTCG
GGCGACTGCC GGCCGCCGGA GCTCGCGGTG CGCATGGCAT GGGACGCCGG GGTGGGCAAC
ATCAACGGCG GCGATACCAC CATCACCCGC AGTTCGCCGT CGTGGACCGA GATCGCATCG
CTGGGCATCG ACAAGGGGCC CGGCGCCTAC CAGGTCTTCG CCCCCAACCA GAACGAGAAC
GTCTATACCA ATGACTGGAC CGGTCCGTAC TATGGCTTCG ATCGCCTGAT CGAAACGCTG
CAGATGACCG ATACGCCCTA TCGCTTCAAG CCGATCAACC TCTACTACCA CATGTACTCG
GGCACCAAGC TTGCGTCGCT CAAGGCATTG AAGAAGGTCT ACGACTACGC GCTCGCGCAG
CCGGTGCTGC CCATCTATGC GACCGACTAC GTGGCCAAGG TGCTCGACTT CCGAGACATG
GCCATCGCCC GCGACGGCGA TGCCTGGGTC GTGCGCGGCA ACGGCGATCT GCGCGAGCTG
CGCTGGATGG CGCCGGGCAC GCCCCGCCTG GCCGATGCGC ACGGCGTCGC GGGCTATGGC
AAGGCGGCCG GCGGAATCTA CATCCATCTT GATGGCGGCG CGGCACGCTT TGCCGTGTCG
ACCGATGCGC AGGCCGTCCA GCCGGCCTAT CTGGCCGAAG CCGCGGCCTT CGTGCAGCGG
CTGGAGCGGC GCGGCAACGG CATGTCCTTC GACGCGGGCG GCTACTACAA GCCGTTCGTG
CGGCTCGCCA ATGCCGGCGC GTGCAGCATC CAGGTCGACG GCCGGCCGGC CCGCGCGGCC
CATGCGCAGG ACAACACGGT GCGCGTGGAG CTGTCCGGCG TCGCCGCGCA GAGCGTGACT
TACCAGCGTG TCGATGTGGT CTGCTGA
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| Protein sequence | MSEWLAALCA AVVVAMPCGA PAQQAPDAAT GEGALPAQAA TAEAPNIAWF YGDKPPVAQL
RAFDAVVVEP DHGFDPSRAR TPATQWFAYV SVGEVAPGRR WYQALPKAWL AGSNAAWASR
VIDQSQPQWP DFYVDHVIAP LWDKGYRGFF LDTLDSYQLV AKDAAARAAQ EAGMIRVIRA
IKARYPEAKL IFNRGFEILP QVHDLVYAVA FESLYRSWDQ GSKQYREVND ADRAWLMGQA
RRIRDEYRLP VISIDYCPPA DRACARETAR RIEAQGLIPY VTDPALSTIG VGRIEVLPRK
VLILQDRAPN TDIDTSEGVR FLAMPLNFLG YDVEYADLGQ PLPAEVPPDR YAGVVVWINS
GPVRQVAALS SWVRQRIHDG VRIAFMNELG LPADGSLTDM LGLQLVRGHA TGPLSVVSQD
RIVGFEMAPR PDRRAAQPIR VGADGQSLLR LKSGDFEFDA AAITPWGGYV LNPYAVFSLG
TIEQSRWVIQ PLAFLRRALA LPDMPIPDVT SENGRRLMLV HVDGDGFASR AEFPGPEYSG
EVLMQEVWER YGIPTTLSVI EGEVGPSGLY PKLTPRLEAI ARKMFALPYV ELGTHTYSHP
FKWGRTVPGA PAQAGGGDSA FALTIPGYKF SLEREIGGSI RYINARLAPP DKRVRIVQWS
GDCRPPELAV RMAWDAGVGN INGGDTTITR SSPSWTEIAS LGIDKGPGAY QVFAPNQNEN
VYTNDWTGPY YGFDRLIETL QMTDTPYRFK PINLYYHMYS GTKLASLKAL KKVYDYALAQ
PVLPIYATDY VAKVLDFRDM AIARDGDAWV VRGNGDLREL RWMAPGTPRL ADAHGVAGYG
KAAGGIYIHL DGGAARFAVS TDAQAVQPAY LAEAAAFVQR LERRGNGMSF DAGGYYKPFV
RLANAGACSI QVDGRPARAA HAQDNTVRVE LSGVAAQSVT YQRVDVVC
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