Gene RSc2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2265 
SymboltISRso11b 
ID1221110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2456674 
End bp2457483 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content59% 
IMG OID637238664 
Productisrso11-transposase orfb protein 
Protein accessionNP_520386 
Protein GI17546984 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.654109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.311626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGAGCT TGCTCAAGGC CGCGAATCTC GCACGCAGCA CGTACTACTA CCAGATGGCG 
ACAGGCCAGG CAGAGGATCG TCACGGCGCG CTCAAGGAGC GCATTCAGCA CATCTATGCC
CAGCACAAGG GCCGATATGG CTACCGCCGG ATCACGGCGA CGCTCCGTCG GGCAGGGACG
TTGGTGAATC ACAAGACCGT ACAGCGATTG ATGTCGGCGC TACAGTTGAA GTCACTCGTG
CGGCCGAAGA AATACCGCTC TTACCTCGGG CAAGTCGGGC GGGTTGCTCC CAATCTGCTA
CAGCGCGAGT TTGAGGCGAG CAAGCCGAAC GAGAAGTGGG TAACGGACGT GACGGAGTTC
AACGTCGGCG GCAAAAAGCT GTACCTGTCG CCCGTCCTGG ACCTATACAA CGGAGAGATC
GTCGCCTGGC AAACCAGTGA ACGACCTGAT TACACGCTGA TCCGGGAGAT GCTCGACAAG
GCGTTGCGCA AGCTGCGCCC GTGCGAGACG CCGATGCTGC ATTCGGATCA AGGCTGGCCG
TATCAAATGG CAGCGTATCG TCGCAAACTG GCCGCGCGAG GCCTGCGCCA GAGCATGTCC
CGCAAAGGCA ACTGCCTAGA CAATGCGGCA ATGGAAAGCT TCTTCGGCAC ACTCAAGTCA
GAGTGCTTCC GGTTAGAGCG CTTCGCGGAC ATCGACCAAC TGCGACGCGC CATTGCCGAA
TACATCCGGT ACTACAATCA CGAGCGCATC AAGATCAAGC TAAAAGGGCT GAGCCCTGTG
CAATACAGGA CCCAGCCCTT GGCCGCCTAA
 
Protein sequence
MSSLLKAANL ARSTYYYQMA TGQAEDRHGA LKERIQHIYA QHKGRYGYRR ITATLRRAGT 
LVNHKTVQRL MSALQLKSLV RPKKYRSYLG QVGRVAPNLL QREFEASKPN EKWVTDVTEF
NVGGKKLYLS PVLDLYNGEI VAWQTSERPD YTLIREMLDK ALRKLRPCET PMLHSDQGWP
YQMAAYRRKL AARGLRQSMS RKGNCLDNAA MESFFGTLKS ECFRLERFAD IDQLRRAIAE
YIRYYNHERI KIKLKGLSPV QYRTQPLAA