Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2265 |
Symbol | tISRso11b |
ID | 1221110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2456674 |
End bp | 2457483 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637238664 |
Product | isrso11-transposase orfb protein |
Protein accession | NP_520386 |
Protein GI | 17546984 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.654109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.311626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGAGCT TGCTCAAGGC CGCGAATCTC GCACGCAGCA CGTACTACTA CCAGATGGCG ACAGGCCAGG CAGAGGATCG TCACGGCGCG CTCAAGGAGC GCATTCAGCA CATCTATGCC CAGCACAAGG GCCGATATGG CTACCGCCGG ATCACGGCGA CGCTCCGTCG GGCAGGGACG TTGGTGAATC ACAAGACCGT ACAGCGATTG ATGTCGGCGC TACAGTTGAA GTCACTCGTG CGGCCGAAGA AATACCGCTC TTACCTCGGG CAAGTCGGGC GGGTTGCTCC CAATCTGCTA CAGCGCGAGT TTGAGGCGAG CAAGCCGAAC GAGAAGTGGG TAACGGACGT GACGGAGTTC AACGTCGGCG GCAAAAAGCT GTACCTGTCG CCCGTCCTGG ACCTATACAA CGGAGAGATC GTCGCCTGGC AAACCAGTGA ACGACCTGAT TACACGCTGA TCCGGGAGAT GCTCGACAAG GCGTTGCGCA AGCTGCGCCC GTGCGAGACG CCGATGCTGC ATTCGGATCA AGGCTGGCCG TATCAAATGG CAGCGTATCG TCGCAAACTG GCCGCGCGAG GCCTGCGCCA GAGCATGTCC CGCAAAGGCA ACTGCCTAGA CAATGCGGCA ATGGAAAGCT TCTTCGGCAC ACTCAAGTCA GAGTGCTTCC GGTTAGAGCG CTTCGCGGAC ATCGACCAAC TGCGACGCGC CATTGCCGAA TACATCCGGT ACTACAATCA CGAGCGCATC AAGATCAAGC TAAAAGGGCT GAGCCCTGTG CAATACAGGA CCCAGCCCTT GGCCGCCTAA
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Protein sequence | MSSLLKAANL ARSTYYYQMA TGQAEDRHGA LKERIQHIYA QHKGRYGYRR ITATLRRAGT LVNHKTVQRL MSALQLKSLV RPKKYRSYLG QVGRVAPNLL QREFEASKPN EKWVTDVTEF NVGGKKLYLS PVLDLYNGEI VAWQTSERPD YTLIREMLDK ALRKLRPCET PMLHSDQGWP YQMAAYRRKL AARGLRQSMS RKGNCLDNAA MESFFGTLKS ECFRLERFAD IDQLRRAIAE YIRYYNHERI KIKLKGLSPV QYRTQPLAA
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