| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2259 |
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| Symbol | |
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| ID | 1221104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2451063 |
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| End bp | 2451755 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238658 |
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| Product | amino acid ABC transporter transmembrane protein |
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| Protein accession | NP_520380 |
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| Protein GI | 17546978 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.672671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAC TCATCCAGAC CTACGGCCTC TACTACCTGA TTGGACAGTA TCCGAACGGC
CCCCTGGGCG GCCTGGCGCT CACGCTGCTG CTGGCCGCCG CCGGCCTGGT GCTGGCGCTG
CCCGCGGGCA TCCTGCTCGG CCTGTGCCGG GTCAGCCCGT TCCGGCTGCT GCGCTGGCCG
GCCACGGCGC TGGTCTACGT GGTGCGCGGC ACGCCGCTGC TGATGGTGAT CTTCTGGGCG
TACTTCCTGC TGCCCACGCT CACCGGCCAG CGCACCGACC AGTTCAACAC CATGCTGACC
GCGCTGGTGG TCTTCGATGC CGCGTACCTG GCCGAGATCG TCCGCGCGGG CATCCAGGCC
CTGCCGCGCG GGCAGATGGA GAGCGCGCGC TCGCTGGGCC TGCCGTACCT GCAGGCGATG
CGGCTGGTGC TCCTGCCGCA GGCGCTGCGC AACATGCTGC CCTCGCTGGT CAACCAGCTC
GTGTCCACCA TCAAGGAGAC CTCGCTCGGC TACATCATCA GCCTGCCCGA AGTGTCGTTC
GTGGCCGGGC AGATCAGTAC GTCGGTCATG ACCCAGTCGG CCGAGGTGTA CGGCCTGCTG
GCGCTGAGCT ACTTCGCGAT GTGCTTTGGC CTGACCCGCG TGGCCTTCCT GCTGGAGCGG
CGCCTGGCGG CGCGCGCACT GACCCAACCA TGA
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| Protein sequence | MLELIQTYGL YYLIGQYPNG PLGGLALTLL LAAAGLVLAL PAGILLGLCR VSPFRLLRWP
ATALVYVVRG TPLLMVIFWA YFLLPTLTGQ RTDQFNTMLT ALVVFDAAYL AEIVRAGIQA
LPRGQMESAR SLGLPYLQAM RLVLLPQALR NMLPSLVNQL VSTIKETSLG YIISLPEVSF
VAGQISTSVM TQSAEVYGLL ALSYFAMCFG LTRVAFLLER RLAARALTQP
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