| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2254 |
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| Symbol | pcaI |
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| ID | 1221099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2446514 |
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| End bp | 2447203 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238653 |
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| Product | 3-oxoadipate CoA-transferase subunit A protein |
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| Protein accession | NP_520375 |
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| Protein GI | 17546973 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0955089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATCAACA AGATTTGCCT GTCCGTGGAG GCCGCGCTGG CCGATATCCC GGACGGCGCC
ACCATCATGA TCGGCGGGTT CGGTACCGCC GGCATGCCCG CTGCGCTCAT CGACGGGCTC
ATCGCCCACG GCGCGCGCGA GCTGACCATC ATCAACAACA ACGCCGGCAA CGGCGAGACG
GGCCTGGCGG CGCTGCTCAA GGCGCGGCGC GTGCGCAAGA TCGTCTGCTC GTTCCCGCGC
CAGTCCGACT CGTACGTGTT CGACGCGCTC TACCGCGCCG GCGAGATCGA GCTGGAGCTC
GTGCCGCAGG GCAACCTGGC CGAGCGCATT CGCGCGGCGG GCGCCGGCAT CGGCGGCTTT
TTCTGCCCGA CCGCCTACGG CACGCAACTG GCCGAAGGCA AGGAGACGCG CATCATCGAC
GGCAAGCCCT ACGTGTTCGA ACTGCCGCTG ACCGCCGACT ACGCCCTCAT CAAGGCCCTG
CGCGGTGATC GCTGGGGCAA CCTGGTCTAC CGCAAGACCG CGCGCAACTT CGGCCCCGTG
ATGGCGATGG CGGCCAAGTG CACCATCGCC GAGGTCGATG CGACCGTCGA GCTGGGCGCG
CTGGACCCGG AGCACATCGT CACGCCGGGC ATCTTCGTCA AGCGCATCGT GCCGGTCGGC
GCCGCCGCGC AAACCAGGGA GGCCGCATGA
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| Protein sequence | MINKICLSVE AALADIPDGA TIMIGGFGTA GMPAALIDGL IAHGARELTI INNNAGNGET
GLAALLKARR VRKIVCSFPR QSDSYVFDAL YRAGEIELEL VPQGNLAERI RAAGAGIGGF
FCPTAYGTQL AEGKETRIID GKPYVFELPL TADYALIKAL RGDRWGNLVY RKTARNFGPV
MAMAAKCTIA EVDATVELGA LDPEHIVTPG IFVKRIVPVG AAAQTREAA
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