| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2236 |
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| Symbol | valS |
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| ID | 1221081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2427269 |
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| End bp | 2430175 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238635 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | NP_520357 |
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| Protein GI | 17546955 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC CGAACCAGTC CCTTGCCAAG AGTTTCGAAC CCGCCGCCAT CGAGCAGAAG
TGGAGCGCGG CATGGGAAGC GATGGGCATC TCCCGCGCAA CGCTCGAAGC CGGCCGCCCG
GATTTCTGCA TCCAGCTGCC GCCGCCGAAC GTGACCGGCA CGCTGCACAT GGGGCATGCC
TTCAACCAGA CCATCATGGA CGGCCTCGCG CGCCACGCGC GCATGCAGGG CGCCAACACG
CTGTGGGTGC CCGGCACCGA CCACGCCGGC ATCGCCACGC AGATCGTGGT GGAGCGCCAG
CTGGACGCCC AAGGCATCTC GCGCCATGAC CTGGGCCGCC CGGCCTTCGT CGACAAGGTC
TGGGAGTGGA AGGAGCAATC GGGCTCGACC ATCACCCGGC AGATCCGCCG CATGGGCGCC
TCGATCGACT GGGAGCGCGA GTACTTCACG ATGGACCCGA AGATGTCGCG CGCGGTCAGC
GACGTGTTCG TGCGCCTGTA CGAGCAGGGC CTGATCTACC GCGGCAAGCG CCTGGTCAAC
TGGGACCCGG TGCTGGGCAC CGCCGTGTCC GACCTCGAAG TCGTGAGCGA GGAAGAAGAC
GGCGCGCTGT GGCACATCCG CTACCCGCTA GCCCAGCCCG ATGCCAAGAC CGGCCTCACG
CACCTGACGG TCGCCACCAC GCGCCCGGAA ACCATGCTCG GCGACGTGGC CGTGATGGTG
CATCCGGAAG ACGAGCGCTA TGCCCACCTG ATCGGCCAGG CCGTGCGCCT GCCGCTGTCC
GGTGAGGCCG ATGCGCTGGA CACCGCCCAA TGGCGCGAGA TCCCCATCAT CGGCGACGAA
TACGTCGACC GTGCGTTCGG CACCGGCGTG GTCAAGGTGA CCCCGGGCCA CGACTTCAAC
GATTACGCCG TCGGCCAGCG CCACGGCCTG CCGCAGATCT CGGTGCTGAC GCTGGAGGCG
AAGATCGCCG ACACCGCGCC CGCGACCTAT CGCGGCATCG ACCGCTTCGA GGCCCGCAAG
CGCATCGTGG TCGACCTGGA AACGCTGGGC CTGCTGGCCG AGGTGAAGAA GCACACGCTG
ATGGTGCCGC GCGGCGACCG CACCGGCGTC ATCATCGAGC CGATGCTGAC CGACCAGTGG
TTCGTCGCCA TGAGCAAGCC GGCGCCCGAA GGCACGCGCT TCCCGGGCCG CTCGATCGCC
GAGGTGGCGC TGGATGCGGT GCAGGGCGGC AAGATCAAGC TGGTGCCCGA GCAGTGGGTC
AACACCTACA ACCAGTGGCT CAACAACATC CAGGACTGGT GCATCTCGCG CCAGTTGTGG
TGGGGCCACC AGATCCCGGC GTGGTACGAC GAGGCCGGCA ACGTCTACGT CGCCCGCACC
GAAGAGGAAG CCCGCGCCCA GGCAGCAGCC AAGGGCCATA CCGGCGCGAT CAAGCGCGAT
GACGACGTGC TCGACACGTG GTTCTCGGCG GCGCTGGTGC CGTTCTCTTC GCTGGGCTGG
CCGGCCGACA CGCCCGAGCT GAAGCACTTC CTGCCCTCCA CCGTGCTGGT GACCGGCTAC
GACATCATCT TCTTCTGGGT GGCGCGCATG GTCATGATGA CCCTGCACTT CACCGGCGAA
GTGCCCTTCC AGACCGTCTA CGTGCACGGC CTCGTGCGCG ACTCGGAAGG CAAGAAGATG
AGCAAGTCCG AAGGCAACAC GCTCGATCCG GTCGACCTGA TCGACGGCAT CGCGCTGGAG
CCGCTGCTGG TCAAGCGCAC CACCGGCCTG CGCCGCCCGA AGGACGCGCC CAACGTCGAG
AAGCGCACGC GCAAGGAATT CCCGGACGGC ATCCCCGCCT TCGGCGCCGA CGCGCTGCGC
TTCACCTTCG CATCGCTGGC CACGCTCGGC CGCAACATCA ACTTCGACTC CAGCCGCTGC
GAGGGCTACC GCAACTTCTG CAACAAGCTG TGGAACGCCA CCCGCTTCGT GCTGATGAAC
ACCGAGGGCC AGGACTGCGG CCTGCAAGAG TGCGTCGGCG ACTGCGGCCC GGAAGGCGCC
CTGCACTTCT CGCCGGCCGA CCGCTGGATC GTGTCGCTGC TGCAGCGCGT GGAAACCGAA
GTCGAAAAGG GCTTCGCCGA CTACCGCTTC GACAACATCG CCAGCGCCAT CTACAAGTTC
GTCTGGGACG AATACTGCGA CTGGTACCTG GAGCTGGCCA AGGTGCAGAT CCAGACCGGC
ACTCCGGCCC AGCAGCGCGC CACCCGCCGC ACGCTGCTGC GCGTGCTGGA GACGGTGCTG
CGCCTGGCGC ATCCGATCAT CCCGTTCATC ACCGAGGAGC TCTGGCAGAA GGTCGCGCCG
ATGGCCGGCC GCGCCAAGGG CGACGGCACC GAAAGCCTGG CGCAGCAGGA ATACCCGCGC
GCCGTGCTGG CCAAGATCGA CGAGCAGGCC GAGCAATGGG TGCAGCAGCT CAAGGCGCTG
GTCGATGCCT GCCGCAACCT GCGCGGCGAG ATGAGCCTCT CCCCCGCGCA GCGCGTGCCG
CTCTACGCCC ACGGCGATGC CGAATTCCTG CAGGCCGCCG CGCCCTACGT GCAGGCGCTG
GGCAAGCTGT CGGAAGTGAA GGTTTACACC GATGCCGCCG CCATGGAGCA GGACGGCGCG
GGCGCGCCGG TCGCCATCGT CGGCGAGAAC AAGCTGCTGC TGAAGATCGA GATCGACGTG
GCGGCCGAAC ACGCGCGCCT GTCGAAGGAA ATCGATCGCC TGCGCGGCGA GATCGTCAAG
TGCGAAGGCA AGCTGGGCAA CGAGTCGTTC GTCGCCCGCG CGCCGGCGGC CGTGGTGGAG
CAGGAACAGA AGCGCCTGGC GGACTTCAAG GCCACGCTCG GCAAGCTCGA AGCCCAGATC
GCGCGCCTGC CGGTACAGAC CGCCTGA
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| Protein sequence | MTDPNQSLAK SFEPAAIEQK WSAAWEAMGI SRATLEAGRP DFCIQLPPPN VTGTLHMGHA
FNQTIMDGLA RHARMQGANT LWVPGTDHAG IATQIVVERQ LDAQGISRHD LGRPAFVDKV
WEWKEQSGST ITRQIRRMGA SIDWEREYFT MDPKMSRAVS DVFVRLYEQG LIYRGKRLVN
WDPVLGTAVS DLEVVSEEED GALWHIRYPL AQPDAKTGLT HLTVATTRPE TMLGDVAVMV
HPEDERYAHL IGQAVRLPLS GEADALDTAQ WREIPIIGDE YVDRAFGTGV VKVTPGHDFN
DYAVGQRHGL PQISVLTLEA KIADTAPATY RGIDRFEARK RIVVDLETLG LLAEVKKHTL
MVPRGDRTGV IIEPMLTDQW FVAMSKPAPE GTRFPGRSIA EVALDAVQGG KIKLVPEQWV
NTYNQWLNNI QDWCISRQLW WGHQIPAWYD EAGNVYVART EEEARAQAAA KGHTGAIKRD
DDVLDTWFSA ALVPFSSLGW PADTPELKHF LPSTVLVTGY DIIFFWVARM VMMTLHFTGE
VPFQTVYVHG LVRDSEGKKM SKSEGNTLDP VDLIDGIALE PLLVKRTTGL RRPKDAPNVE
KRTRKEFPDG IPAFGADALR FTFASLATLG RNINFDSSRC EGYRNFCNKL WNATRFVLMN
TEGQDCGLQE CVGDCGPEGA LHFSPADRWI VSLLQRVETE VEKGFADYRF DNIASAIYKF
VWDEYCDWYL ELAKVQIQTG TPAQQRATRR TLLRVLETVL RLAHPIIPFI TEELWQKVAP
MAGRAKGDGT ESLAQQEYPR AVLAKIDEQA EQWVQQLKAL VDACRNLRGE MSLSPAQRVP
LYAHGDAEFL QAAAPYVQAL GKLSEVKVYT DAAAMEQDGA GAPVAIVGEN KLLLKIEIDV
AAEHARLSKE IDRLRGEIVK CEGKLGNESF VARAPAAVVE QEQKRLADFK ATLGKLEAQI
ARLPVQTA
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