Gene RSc2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2229 
Symbolndh 
ID1221074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2417026 
End bp2418351 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content69% 
IMG OID637238628 
ProductNADH dehydrogenase, membrane flavoprotein FAD NAD ubiquinone electron transport oxidoreductase 
Protein accessionNP_520350 
Protein GI17546948 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGGC AGGTGGACGG CGCGGGTGGT CCGCGCATCG TGGTGGTCGG CGGTGGCGCC 
GGCGGGCTGG AACTGGCAAC GCGCCTGGGC GACAAGCTCG GCAAGCGCCG CGCCGCGCGG
GTCGTCCTGG TCGATCGCAA CCCGACACAT ATCTGGAAGC CGCTGCTGCA CGAAGTGGCC
GCCGGCAGCA TGGACCCGAA CACCCACCAG CTCGAATACG CCGCCCAGGC GCGCTGGCAC
GGCTTCGAGT TCCAGCAGGG CGAGCTGAAG GGCCTGGACC GCGCCGCCAA GACCATCACC
GTGTCCGGCT GCGTCGACGC CGACGGCACC GAGGTGCTGC CCGAGCGCGC CATCGCCTAT
GACATGCTGG TGCTCGCCAT CGGCAGCGTG ACGCATTTCT TCGGCGTGCC GGGCACGGCC
GAGCATGCGA TTGCGCTGGA TGCCGCGTCG CAGGCCGAGC GCTTCCGCCG CAAGCTGATT
TCGGCGTGCA TGCGCGCGCA GAACGGCGTG GGCGATGCGC GCGCGCAGGT GGACATCGCC
ATCGTCGGCG CGGGCGCGAC CGGCGTGGAA CTGTCGGCGG AACTGCGCAA CACCGCCCAC
GTGCTGGCGG CCTACGGCCT GCACAAGCTG GACCCGCTCC GCGATATCCG CATCCACCTG
ATCGAAGGGA GCCCGCGCAT CCTGGCCGCC CTGTCCGAAC GTGTCTCCAC CGAGACCACC
AAGCTGCTGC AGAAGCTGAA CGTGGAGGTG ATCACCGGCG AGCGCGTCAA CCAGGTCACC
GACAGCGCGG TCAAGACGGC CAGCGGCAAG TCGATCCCGG CCGATCTGAC GGTGTGGGCG
GCGGGCATCC GCGCGCCGGC GATCCTGGGC GAGCTGGGGC TGCCGGTGAA CAAGCTGGGG
CAGGTGGTCG TCTCGCGCAC GCTGCAGGCC GAAGGCGATG ACGCCATCTA TGCCTTCGGC
GATTGCGCCA GCTGCCCGTG GCCCGAGGCA TCGGCCAGCG TGCCGCCGCG CGCCCAGGCC
GCCCACCAGC AGGCGACCTA TCTGTATAAA GCCCTGTGCC GCCGGCTGGA AGGCAAGCCG
GTGGAGCCGT TCGGCTTCAA GGATCTGGGC TCGCTGGTGT CGCTCGGCCA CTTCAGCGCG
GTCGGCAGCC TGATGGGCGG CCTGATCGGC GGCACCATGT TCATCGAAGG GATGATGGCG
CGGCTGATGT ACACGTCGCT GTACCGCATG CACGTGATGG CGCTGCACGG CTTCGTGCGC
ATGGCGCTGG ATACCGTCAC GCACTGGCTG CGCAGCAAGA CCAATCCGCG GGTCAAGCTA
CACTAG
 
Protein sequence
MAGQVDGAGG PRIVVVGGGA GGLELATRLG DKLGKRRAAR VVLVDRNPTH IWKPLLHEVA 
AGSMDPNTHQ LEYAAQARWH GFEFQQGELK GLDRAAKTIT VSGCVDADGT EVLPERAIAY
DMLVLAIGSV THFFGVPGTA EHAIALDAAS QAERFRRKLI SACMRAQNGV GDARAQVDIA
IVGAGATGVE LSAELRNTAH VLAAYGLHKL DPLRDIRIHL IEGSPRILAA LSERVSTETT
KLLQKLNVEV ITGERVNQVT DSAVKTASGK SIPADLTVWA AGIRAPAILG ELGLPVNKLG
QVVVSRTLQA EGDDAIYAFG DCASCPWPEA SASVPPRAQA AHQQATYLYK ALCRRLEGKP
VEPFGFKDLG SLVSLGHFSA VGSLMGGLIG GTMFIEGMMA RLMYTSLYRM HVMALHGFVR
MALDTVTHWL RSKTNPRVKL H