| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2222 |
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| Symbol | ispA |
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| ID | 1221067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2410485 |
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| End bp | 2411384 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637238621 |
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| Product | geranyltranstransferase |
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| Protein accession | NP_520343 |
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| Protein GI | 17546941 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT TCGCCCACTG GATGGCCTCC GTCGTTGCAC GGACGGAAAG CGCGCTCGAA
CGCGCCCTGC CCGGCGAATC GGTCGCGCCG CAGCGCCTGC ATGCGGCGAT GCGCTATGCC
ACGCTGGGGG CGGGCAAGCG GGTCCGCCCC CTGCTCGCGC ATGCTGCCGG GGCGCTGGGC
GAGGCATCGC CCGAGGCGCT GGACGGCGTG AGCTGCGCGG TGGAGATGAT CCACGCCTAT
TCGCTGGTCC ACGACGACAT GCCCTGCATG GACGACGATG ACCTGCGCCG AGGTCGCCCG
ACGGTGCATC GCGCCTATGA TGAAGCGACG GCGCTGCTGG TCGGCGACGC TTTGCAGACC
CAGGCCTTCA TCGCGCTGGC CGAGCTGGGC GCGGTGAGCC CGGCCACGCG CGCCGGACTG
GTCGGCGAGT TGGCGCGCGC GTCGGGTTCG CTCGGCATGG CGGGCGGGCA GGCGATCGAT
CTGCAGAGCG TTGGCGTGGC CCTGTCGCAG GATGCGCTGG AGACCATGCA CCGCATGAAG
ACCGGCGCGC TGCTGCGGGC AAGCCTGCGC ATGGGCGCCC TGTGCGCCGG CGTGAATGCC
GCGGCGCTGG AACAGGTGGA CGCCTACGCG GGCGCGGTCG GACTGGCGTT CCAGGTGGTC
GACGACATTC TCGACGTGAC GGCCGACACC GCCACGCTGG GCAAGACCGC CGGCAAGGAC
GAGGCCAACG ACAAGCCGAC CTATGTGTCG ATCCTCGGCC TGGAGCGCGC GCGGGCGCTG
GCCGATGCGT TGCATGCCGC GGCGGGCGCG GCGGTGGCGC AGCTGTCCCG CGAACTGGGT
GAAGCGCGCA CCGCCAGGCT GGCCGGGATG GCCGACCTGA TCGTGTGGCG TGGCCACTGA
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| Protein sequence | MSDFAHWMAS VVARTESALE RALPGESVAP QRLHAAMRYA TLGAGKRVRP LLAHAAGALG
EASPEALDGV SCAVEMIHAY SLVHDDMPCM DDDDLRRGRP TVHRAYDEAT ALLVGDALQT
QAFIALAELG AVSPATRAGL VGELARASGS LGMAGGQAID LQSVGVALSQ DALETMHRMK
TGALLRASLR MGALCAGVNA AALEQVDAYA GAVGLAFQVV DDILDVTADT ATLGKTAGKD
EANDKPTYVS ILGLERARAL ADALHAAAGA AVAQLSRELG EARTARLAGM ADLIVWRGH
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