Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2207 |
Symbol | |
ID | 1221051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2391629 |
End bp | 2392201 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637238605 |
Product | putative TRP repressor binding protein |
Protein accession | NP_520328 |
Protein GI | 17546926 |
COG category | [R] General function prediction only |
COG ID | [COG0655] Multimeric flavodoxin WrbA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.503271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGAG TTGCAGTCGT TTATCACAGC GGTTATGGCC ATACCAAGAA GCAGGCCGAG GCGGTGTTCG CGGGCGTGCA GGCCGCCGGC GCCGAAGCGC ACCTGATCTC GGTGGCCGAC GTCAATGACC AGACCTGGGC ACTGCTGGCC GGCGTCGACG CCATCGTTTT CGGCGCGCCG ACCTATATGG GCGGCGTGTC GGGCGACTTC AAGAAATTCG CCGATGCCTC GTCCAAGGCC TGGTTCACCG GCCAATGGAA GGACAAGATC GCCGCGGGCT TCACCAACTC CGCATCGATG AACGGCGACA AGTACGCATC GATCCAGTAC CTGTGGACGC TGTCGCAGCA GCACGGGATG ATCTGGGTGG GCACCGGCAT GATGCCGGCC AGCAGCAAGG CTGCCACCCG CAACGACATC AACTACATGG GCGGCTTCGG CGGCGCGCTG TCGCAGGCGC CGTCGGATGC GAGCCCGGAA GAGGGGCCGC TGCCCGGCGA CCTGGAGACC GCCAGGCTGT TCGGCGAGCG CGTCGTCGCC GTGACCCGGC AGTTCGTGCG CGGCCGCCAG TAA
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Protein sequence | MARVAVVYHS GYGHTKKQAE AVFAGVQAAG AEAHLISVAD VNDQTWALLA GVDAIVFGAP TYMGGVSGDF KKFADASSKA WFTGQWKDKI AAGFTNSASM NGDKYASIQY LWTLSQQHGM IWVGTGMMPA SSKAATRNDI NYMGGFGGAL SQAPSDASPE EGPLPGDLET ARLFGERVVA VTRQFVRGRQ
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