| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2205 |
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| Symbol | dnaE |
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| ID | 1221049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2387018 |
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| End bp | 2390539 |
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| Gene Length | 3522 bp |
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| Protein Length | 1173 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238603 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | NP_520326 |
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| Protein GI | 17546924 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.344019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCGC CGCGCTTCGT CCATCTCCGT CTCCATTCCG AATATTCCGT CGTCGACGGC
AACGTCCGCC TGGACGAGGC CGTCAAGGCC GCCGCCGCCG ATGGCATGGG CGCGCTGGCG
CTGACCGACC TTGCCAACGC TTTCGGCCTG GTGCGCTTCT ACAAGGAAGC GCGCGGCAAG
GGCGTCAAGC CTATCGTCGG CGCCGACGTG TGGATCACCA ATCACGACGA GCGCGACAAG
CCCAGCCGCC TGCTGCTGCT GGTGCGCAAC AAGCAGGGCT ACCTGAACCT GTGCATGCTG
CTGGCGCGCG CCTGGCTGTC CAACCAGCAT CGCGGCCGCG CGGAGGTCGC CCCCGAGTGG
TTCGGCGAGC CCGGCGTGGA AGAGGCGCCG ATGGCCACCG GCCTGCTGGC GCTGTCCGGC
GCGATGGGCG GCGACATCGG CATGGCGCTC GCCAACGGCA ACGAGGCGCT GGCGCGCAAG
CTGGCGACGC AGTGGTCGCA GGTGTTCCCG GCGTCGTTCT ACATCGAGCT GCAGCGCGCC
GGGAACGCCG GCACCGAGGC CTACGTCCAG CAGGCCGTGA AGCTGGCCGC GTCGATGCAG
CTGCCGGTGG TCGCCACGCA TCCGGTGCAG TTCATGACGC CGGACGACTT CACCGCGCAC
GAGGCGCGCG TCTGCATCGC CGAGGGCGAT CTGCTCGCCA ACCCGCGCCG CACCAGGCGT
TTCACGACCG ACCAATATTT CAAGACGCAG GACGAGATGT GCGCGCTGTT CGCCGACATC
CCGTCCGCGC TGGCCAACAC GGCGCAGATC GCGCAGCGCT GCAACCTGAC GCTGGAACTG
GGCAAGCCCA AGCTGCCGCT GTTCCCCACG CCCGACGGCA TGTCGCTGGA CGACTACCTC
GTCCACCTGG CCAAGGACGG GCTGGAGAAG CGCATGGCCG TGCTGTTCCC CGACGAGGCG
GTGCGCGAGG CCAAGCGGCC CGAGTACTAC GCGCGGCTGG AGTTCGAGAC CGGCACCATC
ATCAAGATGG GCTTCCCGGG CTACTTCCTG ATCGTGGCGG ACTTCATCAA CTGGGCCAAG
AACAACGGCG TGCCGGTGGG GCCGGGCCGG GGCTCGGGCG CGGGCTCGCT GGTGGCGTAC
GCGCTGGGCA TCACCGACCT GGACCCGCTC AAGTACAACC TGCTGTTCGA GCGCTTCCTG
AACCCGGAAC GGGTGTCGAT GCCCGACTTC GACATCGACT TCTGCCAGCA CGGCCGCGAC
CGCGTCATCC ACTACGTGAA GGAGAAGTAC GGCAAGGACG CCGTCTCGCA GATCGCCACC
TTCGGCACCA TGGCCGCCAA GGCCGCGGTG CGCGACGTGG GCCGCGTGCT GGATCTCGGC
TACAACTTCG TCGACGGCGT GGCCAAGCTG ATCCCGTTCA AGCCGGGCAA GCTGGTCACC
ATCGAGGAAG CCAAGAAGGA AGAGCCGCTG CTGGCCGAGC GCGAGGCCAA TGAAGAAGAG
GTCAAGCAGC TGCTCGAACT CGCCCAGCGC GTCGAAGGCA TGACCCGCAA CGTCGGCATG
CACGCGGGCG GGGTGCTGAT CGCGCCGGGC AAGCTGACCG ATTTCTGCCC GCTCTACACC
CAGGGCGGCG AGGATGCCGG CGTCGTCAGC CAGTACGACA AGGACGACGT GGAAGCCGTC
GGCCTGGTGA AGTTCGACTT CCTGGGCCTG ACCACGCTGA CCATCCTGGA CTGGGCCGAG
CGCTACATCC GCACGCTCGA TCCGTCCAGG GCGGACTGGA ACTGCAGCCA CATTCCGCTG
ACCGACAAGG CGGCGTTCGA CATCCTCAAG ACGGCCAACA CGGTCGCCGT GTTCCAGCTG
GAAAGCCGCG GCATGCAGGG CATGCTCAAG GACGCCAAGC CCGACCGCTT CGAGGACATC
ATCGCCCTGG TGGCGCTGTA CCGTCCGGGC CCGATGGACC TGATCCCCAG CTTCTGCGCC
CGCAAGCACG GCCGCGAGAA GGTGGAGTAC CCCGACCCGC GCGTCGAGCC GGTGCTCAAG
GAGACCTACG GCATCATGGT CTACCAGGAG CAGGTGATGC AGATGGCGCA GATCGTGGGC
GGCTACTCGC TCGGCGGCGC CGACCTGCTG CGCCGCGCGA TGGGCAAGAA GAAGGCCGAA
GAGATGGCCG AGCACCGCGA GCTGTTCCGT GGCGGCGCGG CCAAGGACGG TCTGTCCACC
GAGAAGGCCG ACGAGATCTT CGACCTGATG GAGAAGTTCG CGGGCTACGG CTTCAACAAG
TCGCACGCGG CGGCGTATGC GCTGCTGGCG TACTACACCG CGTGGCTCAA GGCGCATCAC
CCGGCCGAAT TCATGGCAGC CAACATGTCG CTCGCCATGG ACGACACCGA TAAGGTGAAG
ATCCTCTACG ACGACGCCCG CGGCAAGAAC GGCCTGGCGG TGCTGCCGCC CGACATCAAC
GCCAGCCAGT ACCGCTTCAC GCCCACCGAC GCCAAGACCA TCCGCTATGG CCTGGGCGGC
GTGAAGGGCA GCGGGCAGGG TGCCATCGAA GACATCCTGC GCGCGCGCGA GGACGGCCCG
TTCAAGGACC TGTTCGACTT CTGCGAGCGT GTCGACCGCC GCCAGGTCAA CCGCCGCACC
ATCGAGGCGC TGGTGCGCGC CGGCGCCTTC GACAGCCTGA ACGCCAATCG CGCGCAGCTG
CTGGTCTCGA TCGGGCTGGC GATGGAGGCG GCCGAGCAGA AGGCGGCAGC GGCCAACCAG
GTCTCGCTGT TCGACCTGAT GGGCAGCGAC GACGCCGAGC AGCATCGCCC GGAGCTGCTC
GACGAGGCGC CCTGGAGCAC CAAGCGCAAG CTGCAGGAAG AGAAGCAGGC GCTGGGCTTC
TATCTGTCGG GGCACCTCTT CGACGAGTGC CGCGACGAGG TCCGCCGCTT TGCCCGCACG
ACGCTCGCCG ACCTCGCCCG CGAGGTCAAC GGCAATGGCA ATAATGGCGG CGGCTACGGC
AGCCGCGACG CGCGCAACAA GACCGTGGCC GGCGTGATCG TCGGCCTGCG CACGCAGATG
ACCCAGCGCG GCAAGATGAT CGTCGTCATG CTCGATGATG GCTCGCAGAG CGAGGCCACC
GAGGTGACGG TCTTCAACGA GCTGTTCGAC GCCAACCGCG CGCTGTTCAA GGAAGACGAG
GTGCTGATCG TGCAGGGCAA CGCGCGGCAC GACACCTTCA CCGGCGGGGT GCGGATGACG
GCCGAGGCCG TGCTGGACCT GACCCAGGCG CGCGCGCGCT ATGCCGACGC GATCGGGCTG
ACGTTCCGCG ACAACGCGTC GGCCGCGCGG CTGCGCGAGC TGCTGACGCC GTACCTGGCG
GCCCAGGTGC CCGGCGTGCG CGTGCGCATC AGCTATGCCG CCAACGGCGC GCGCTGCGAA
GCCGTGCTCG GCGAGCAATG GCAGGTGACG CCATCGGACG AGGTGCTGGC CAGCTTCCGC
TCGGCGCTGT CGACCGAGAA CGTCTACATG ATCTACGGCT GA
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| Protein sequence | MNSPRFVHLR LHSEYSVVDG NVRLDEAVKA AAADGMGALA LTDLANAFGL VRFYKEARGK
GVKPIVGADV WITNHDERDK PSRLLLLVRN KQGYLNLCML LARAWLSNQH RGRAEVAPEW
FGEPGVEEAP MATGLLALSG AMGGDIGMAL ANGNEALARK LATQWSQVFP ASFYIELQRA
GNAGTEAYVQ QAVKLAASMQ LPVVATHPVQ FMTPDDFTAH EARVCIAEGD LLANPRRTRR
FTTDQYFKTQ DEMCALFADI PSALANTAQI AQRCNLTLEL GKPKLPLFPT PDGMSLDDYL
VHLAKDGLEK RMAVLFPDEA VREAKRPEYY ARLEFETGTI IKMGFPGYFL IVADFINWAK
NNGVPVGPGR GSGAGSLVAY ALGITDLDPL KYNLLFERFL NPERVSMPDF DIDFCQHGRD
RVIHYVKEKY GKDAVSQIAT FGTMAAKAAV RDVGRVLDLG YNFVDGVAKL IPFKPGKLVT
IEEAKKEEPL LAEREANEEE VKQLLELAQR VEGMTRNVGM HAGGVLIAPG KLTDFCPLYT
QGGEDAGVVS QYDKDDVEAV GLVKFDFLGL TTLTILDWAE RYIRTLDPSR ADWNCSHIPL
TDKAAFDILK TANTVAVFQL ESRGMQGMLK DAKPDRFEDI IALVALYRPG PMDLIPSFCA
RKHGREKVEY PDPRVEPVLK ETYGIMVYQE QVMQMAQIVG GYSLGGADLL RRAMGKKKAE
EMAEHRELFR GGAAKDGLST EKADEIFDLM EKFAGYGFNK SHAAAYALLA YYTAWLKAHH
PAEFMAANMS LAMDDTDKVK ILYDDARGKN GLAVLPPDIN ASQYRFTPTD AKTIRYGLGG
VKGSGQGAIE DILRAREDGP FKDLFDFCER VDRRQVNRRT IEALVRAGAF DSLNANRAQL
LVSIGLAMEA AEQKAAAANQ VSLFDLMGSD DAEQHRPELL DEAPWSTKRK LQEEKQALGF
YLSGHLFDEC RDEVRRFART TLADLAREVN GNGNNGGGYG SRDARNKTVA GVIVGLRTQM
TQRGKMIVVM LDDGSQSEAT EVTVFNELFD ANRALFKEDE VLIVQGNARH DTFTGGVRMT
AEAVLDLTQA RARYADAIGL TFRDNASAAR LRELLTPYLA AQVPGVRVRI SYAANGARCE
AVLGEQWQVT PSDEVLASFR SALSTENVYM IYG
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