| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2200 |
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| Symbol | |
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| ID | 1221044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2380939 |
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| End bp | 2382717 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238598 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_520321 |
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| Protein GI | 17546919 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTGA CTTCTTCTTC GTCTTCCCAG CCGCCCGCGG CCAGCCAGCC GGGCCACTTC
AAGCGCCTGT GGGCCTACCT GCGTCCCGAA CTCAGCAGCT TCATCCTCGC CATGGTCGCC
ATGGGCGTGG TGGCGGCCAC CGAGGGGATC ATCCCCAAGG TGGTGAAGGA CCTGCTGGAC
CAGGGCTTCG GCGGCGAATA CGCCGGCAAG CTGTGGCGGG TGCCGGCCAT GCTGGTCGGC
ATCGCGGTGG TGCGCGGCGT CGCCCAGTTC GGGGCCACGT ACTTCCTGAG CCTGGTGTCG
AACAAGGTGC TGCTGAACCT GCGCATGAAG ATGTTCGAGC GCCTGCTGCA GGCGCCGGCG
GCGTTCTACC AGCGCAATAC GGCGGCCTCG CTCATCAACG CCGTCATCTT CGAGGTCAAC
CAGGTGCTGC AGGTGCTGAC CGGCGTGTTC ATCACGCTGG TGCGCGATTC GATGACGGTG
CTGGCGCTGC TGATCTTCCT CTTCTATACC AACTGGCGCC TGACGCTGGT GGTGGCCGTG
ATCCTGCCGG TCATCGGGTT CCTGATGTCG CGCATCAACC GCCGCCTGCG TTCGCTCAAT
CGCGAGCACC AGAACCTGAC CAACGAAGCC GCGTACGTGG TGGAGGAGGC GGCCGGCGGC
TACAAGGTCG TCAAGCTGCA CGGCGGCGAG GCCTACGAGT CACGCCGCTT CAATGCCATG
ACCAACCGCC TGCGCGGCTA CGCCATGCGC ATGGCCGTGG CCGGCGGCCT GAACCAGCCG
GTGACGCAGT TCCTGGCGGC GCTGGCGCTG TCCGTCATCC TGGCGATCGC GATGGTGCAG
GCGCAAGCCA ACCAGACCAC CGTCGGCGGC TTCACCGGCT TCGTGATGGC GATGCTGCTG
CTGATCTCGC CGCTCAAGCA CCTGACCGAC GTCAACCAGC CGATGCAACG CGGCCTGACT
GCCGCCGAGT TCATCTTCGG CCTGATCGAC ACGCCGATCG AGCCCCAGGA CGGCGGCAAG
CACATCGACC GCGCGCGCGG CGACCTGCGC TTCGAGCACG TCACCTTCCG CTACGGCCCG
GACGGCCGGG CGGCGCTCGA CAGCATCGAC CTGCACGTCA AGGCGGGCGA GATCGTCGCG
CTGGTGGGCC CGTCGGGCAG CGGCAAGACC ACGCTGGTCA ACCTGCTGCC GCGCTTCTTC
GAGCCGACCT CGGGCCGCAT CGTGCTCGAC GGCGACGCGC TGGCCGACCT GTCGCTGCAG
GATCTGCGCC GCCAGATCGC CTTCGTGAGC CAGGACGTGG TGCTGTTCAA CGATACCATT
GCCGCCAACG TGGCGTATGG CGCGCGCGAT GCCTCCGAGA TCGATATGGC GCGCGTGCGT
CGTGCGCTGG AAGCCGCCTA CCTGACCGAT GTGGTCGACA ACCTGCCTGA TGGCGTCGAC
ACCAACATCG GTGACAACGG CTCCAAGCTG TCCGGCGGCC AGCGCCAGCG CCTGGCGATC
GCCCGCGCCG TCTACAAGGA CGCGCCGATC CTGATCCTGG ACGAAGCCAC CTCCGCGCTC
GATTCCGAGT CCGAGCGCCA GGTGCAGGCC GCGCTGGAAG CCCTGATGCA GGGCCGCACG
ACGCTGGTGA TCGCGCACCG CCTGTCGACC ATCGAGAATG CCGACCGCAT CGTCGTGCTC
GAACACGGCC AGATCGTCGA GGCCGGCACG CATCGCGAGC TGCTCGATCG CGATGGGTTG
TATGCTGGAT TGCATCGCAT CCAGTTCGCC ACGCAATAG
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| Protein sequence | MAVTSSSSSQ PPAASQPGHF KRLWAYLRPE LSSFILAMVA MGVVAATEGI IPKVVKDLLD
QGFGGEYAGK LWRVPAMLVG IAVVRGVAQF GATYFLSLVS NKVLLNLRMK MFERLLQAPA
AFYQRNTAAS LINAVIFEVN QVLQVLTGVF ITLVRDSMTV LALLIFLFYT NWRLTLVVAV
ILPVIGFLMS RINRRLRSLN REHQNLTNEA AYVVEEAAGG YKVVKLHGGE AYESRRFNAM
TNRLRGYAMR MAVAGGLNQP VTQFLAALAL SVILAIAMVQ AQANQTTVGG FTGFVMAMLL
LISPLKHLTD VNQPMQRGLT AAEFIFGLID TPIEPQDGGK HIDRARGDLR FEHVTFRYGP
DGRAALDSID LHVKAGEIVA LVGPSGSGKT TLVNLLPRFF EPTSGRIVLD GDALADLSLQ
DLRRQIAFVS QDVVLFNDTI AANVAYGARD ASEIDMARVR RALEAAYLTD VVDNLPDGVD
TNIGDNGSKL SGGQRQRLAI ARAVYKDAPI LILDEATSAL DSESERQVQA ALEALMQGRT
TLVIAHRLST IENADRIVVL EHGQIVEAGT HRELLDRDGL YAGLHRIQFA TQ
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