Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2194 |
Symbol | |
ID | 1221038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2376478 |
End bp | 2377089 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238592 |
Product | hypothetical protein |
Protein accession | NP_520315 |
Protein GI | 17546913 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC GCAAACTACA ACGCGTGATC GTCGACGCGC TCGAAGACGT CAAGGCGCAG GACATCAAGG TCTTCAACAC GACCCACCTG ACCGAGCTGT TCGACCGCAC GGTCATCGCC AGCGGCACCT CCAACCGCCA GACCAAGGCG CTGGCCGCCT CGGTGCGTGA CGCCGTCAAG GAAGCCGGCG GCCACGTGAT CGCCGTGGAA GGCGAAGACG TGGGCGAGTG GGTGCTGGTC GACTGCGGCG ACGCCGTGGT CCACATCATG CAGCCGCAAC TGCGCCAGTA CTACAACCTG GAAGAGATCT GGGGCGACAA GCCGGTGCGC ATCCAGCTCG GCGGCACCAG CGGCCGCGGC CTGCCCAAGG CCAGCGAAGG CTACGACGAC GAGGAAGACG AGGCCGAAGA AGTCACGCCG GCCAAGCGCC GCACCACCAA GCCGAAACTG GCCGGCGAGC GCCCGACCAA AGCGGCCGCC CCCGCCAAGA CCGCCGCCAA GAAGACGACC AGCCGCCCGG CCACCAAGCG GGCTTCCGGC ACGAGCAAGC CCGCCACGAA GACCGCCGCA AAAACGGCTG CAAAGCGCGC CCCGGCCAAG CGCGCATCGT AA
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Protein sequence | MDIRKLQRVI VDALEDVKAQ DIKVFNTTHL TELFDRTVIA SGTSNRQTKA LAASVRDAVK EAGGHVIAVE GEDVGEWVLV DCGDAVVHIM QPQLRQYYNL EEIWGDKPVR IQLGGTSGRG LPKASEGYDD EEDEAEEVTP AKRRTTKPKL AGERPTKAAA PAKTAAKKTT SRPATKRASG TSKPATKTAA KTAAKRAPAK RAS
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