| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2192 |
|---|
| Symbol | hemF |
|---|
| ID | 1221036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2374827 |
|---|
| End bp | 2375735 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637238590 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | NP_520313 |
|---|
| Protein GI | 17546911 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCC AAGCCGTCCG AGCCTACCTG CTGGATCTGC AGGACCGCAT CACCACCGCC
GTCGGCACGC TCGACGGCGG CACGTTCGTC ACCGACACGT GGGACAAGCC GCCCACCGAA
CGCCTGCGCG GCAGCGGCCG CACCTGCATC CTGGAGAACG GCGCCGTGCT GGAGCGCGGC
GGCGTGGGCT TCTCGCACGT GATGGGCGAC ACCCTGCCGC CGTCGGCCAC GGCCAACCGG
CCCGAGCTGG CCGGGCGCGG CTTCGAAGCG ATGGGCGTGT CGCTGGTGTT CCACCCGCGC
AACCCGTACG CGCCGACCGT GCACATGAAC GTGCGCTGCT TCGTCGCGCA GCGGCCCGAC
GCCGAGCCGG TCTGGTGGTT CGGCGGCGGC ATGGACCTGA CCCCCTACTA CGGCTTCGCG
GAAGACGCCG CGCATTTCCA CCGCACCTGC AAGCAGGCGC TGGAGCCGTT CGGTGAAGAG
CTCTACCCGC GCTTCAAGCA GTGGTGCGAC GACTACTTTT ACCTGAAGCA CCGCAAGGAA
GCGCGCGGCG TCGGCGGCAT CTTCTTCGAC GATTTCGCCG AGCTCGGCTT CGAGCGCAGC
TTCGAGATGA TGCGCGCGGT CGGCGACGCG CTGCTGCCGG CCTGGCTGCC GATCGCCGAG
CAGCGCCACG CCACGCCGTA CGGCGAGCGC GAGCGCGCGT TCCAGGCCTA TCGCCGCGGC
CGCTATGTCG AATTCAACCT GGTGTTCGAC CGCGGCACGC TGTTCGGCCT GCAGAGCGGT
GGGCGAACCG AGTCGATCCT GATGTCGATG CCGCCCGTGG CCAACTGGCG CTACGACTGG
CAGCCGGAGC CGGGCTCGCC GGAAGCGGCG CTCTACACCG ACTTCCTGCC GGCGCGCGAT
TGGGTATGA
|
|---|
| Protein sequence | MDTQAVRAYL LDLQDRITTA VGTLDGGTFV TDTWDKPPTE RLRGSGRTCI LENGAVLERG
GVGFSHVMGD TLPPSATANR PELAGRGFEA MGVSLVFHPR NPYAPTVHMN VRCFVAQRPD
AEPVWWFGGG MDLTPYYGFA EDAAHFHRTC KQALEPFGEE LYPRFKQWCD DYFYLKHRKE
ARGVGGIFFD DFAELGFERS FEMMRAVGDA LLPAWLPIAE QRHATPYGER ERAFQAYRRG
RYVEFNLVFD RGTLFGLQSG GRTESILMSM PPVANWRYDW QPEPGSPEAA LYTDFLPARD
WV
|
|---|
| |