Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2187 |
Symbol | |
ID | 1221031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2368995 |
End bp | 2369921 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238585 |
Product | hypothetical protein |
Protein accession | NP_520308 |
Protein GI | 17546906 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0754091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACCG CGTCTTCTGC GTCCCCCGCC TCCACGCGTC CGGCCGATGC CGGCGGTCTG CTGCTGGCCT CGGTGGGCGC CGTGCTGTTC TCTGCCAAGG CCATCGTCGC CAAGCTGATG TACCGCTACC AGATCGACGC GGTGATGGTG ATCACGCTGC GCATGCTGCT GGCCGCGCCG CTTTTCATGG CGATGGGCTG GTGGCAGTCG CGCCGCGCGG CGCCGCTGGC ACCGGCCGAC CGCTGGCGCA TCGTCGGCTT GGGGCTCATC GGCTACTACC TGTCCAGCTT TCTCGATTTC CTCGGCCTGC AATACATCAC CGCCGGGCTG GAGCGGCTGA TCCTGTTCCT CACGCCGTCG TTCGTGCTGC TGATCACGGC GACGGTGTTC AAGCGGCGCA TCACCGGCCT GCAGTGGCTG TCGATGGCGA TCGCCTACGC CGGCATCGTG ATGGTGTTCG CGCATGACCT AGGCCTGGGC GGCCGCCACG TCTGGCTCGG CGGCGGCCTG GTGCTGGCCA GCGCGCTCAG CTACGGCATC TACCTGCTGG CCAGCGGCGA GCTGGTCCGG CGGGTCGGCT CGATGCGGCT GGTGGCCTAT GCGATGTGCG TGTCGACGGT GGCGTGCATG GTCCAGTTCT TCGTCCTGCG GCCGGTGTCG GCGCTGGTGC TGCCGTGGCA GGTCTACGGC CTGTCGGCCA TCAACTCGGT GTTCTGCACG GTGGCGCCCG TGACGCTGAC CATGATGGCG GTGGCGCGCG TGGGCGCGCC GGTGGCGTCG CAGGCGGGCA TGATCGGGCC GGTGTCGACG CTGCTGCTGG GCTGGTGGCT GCTGGGCGAG CCGATCACGC TGTGGCAGGT CGGCGGCAGT GCGCTGGTGC TGGCCGGGAT GGCACTGCTG TCGCGGCGCG GCAATCAATC GAACTGA
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Protein sequence | MTTASSASPA STRPADAGGL LLASVGAVLF SAKAIVAKLM YRYQIDAVMV ITLRMLLAAP LFMAMGWWQS RRAAPLAPAD RWRIVGLGLI GYYLSSFLDF LGLQYITAGL ERLILFLTPS FVLLITATVF KRRITGLQWL SMAIAYAGIV MVFAHDLGLG GRHVWLGGGL VLASALSYGI YLLASGELVR RVGSMRLVAY AMCVSTVACM VQFFVLRPVS ALVLPWQVYG LSAINSVFCT VAPVTLTMMA VARVGAPVAS QAGMIGPVST LLLGWWLLGE PITLWQVGGS ALVLAGMALL SRRGNQSN
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