Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2170 |
Symbol | |
ID | 1221014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2352813 |
End bp | 2353874 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637238568 |
Product | hypothetical protein |
Protein accession | NP_520291 |
Protein GI | 17546889 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 |
TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.723282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGC CCACTTCCCG CGCCGCGCCG GCCTTGATCG AGATCGTGCG GGCCGGCGTG CTGACGTCGG TGCAGGACCT CGGCCGCACC GGCTATCGCC GCTTCGGCGT GTGCATGTCG GGCGCTCTCG ACCCGCTGTC GCTGTACGTC GGCAACCGGC TGGTGGGCAA CCGCAGCGAT GCGGCCGGCA TCGAGTTCAC GCTGGGCCAC GCCACGCTGC GGTTTCTGGC CGACGGGCTG GTCGCCCTGA CCGGGGCCGA CTGCCTCGCC ACGCTGGATG GGGCGCCCGT CCATGCCTGG CATGCCTTTC CCGTGCAGCG CGGCCAGACG CTGACGCTGC GCGTGGCGCA GGGCGGCGTG CGCGCCTACC TGTGCGTGGC CGGCGGCATC GACGTGCCGG AGATGATGGG CTCGCGCGCC ACCGACCTCA AGGCCGGCTT CGGCGGCTTC GAAGGTCGTC CGCTGCGCGA CGGCGACCGG CTGGCCGCGC TGCCGGCCGA TCGGTCGCAC GCGCCCGACG TCAGCGGCGC CGCGATCGGC GTGAAGGCGC CGCGCTGGAC CTTCGACCGC ATGCGTGGCG AGCTTCCGGT GATGCGCGTG CTGCCCGGTC CCGAGTACGA CGATTTCCTG GCCGATTCGC AGGCCGCGTT CTGGGAATCG GAGTGGACGC TCACCCCCAA CAGCAACCGC ATGGGCTTTC GCCTGCAGGG GCCGGAACTC GTGCGCAGGC AGCTGTGCAG CGGCGACCTG CTGTCGCACG GCGTGGTGCC GGGCGTGATC CAGGTGCCGC CGTCCGGCCA GCCGATCGTG CTGATGGCCG ACGCGCAGAC CACCGGCGGC TACCCGAAGA TCGGCACCGT CATCCTGGCC GACCAGTGGC GCCTGGCGCA GGTGCCGCTC GGCACGCGCA TCCGCTTTGC CCGCGCGACG CTGGAAGAGG CCGAGGCCGC GCGCGCCGAC GTGTCGCGCT ACCTGCAGCA GATCGAGACG GCGCTGGACT GGCAGCGCCG GGGCATCCTG TCGGTGGCGC GGCGCACCGC CAGGACACGC CCGATGGCTT GA
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Protein sequence | MSRPTSRAAP ALIEIVRAGV LTSVQDLGRT GYRRFGVCMS GALDPLSLYV GNRLVGNRSD AAGIEFTLGH ATLRFLADGL VALTGADCLA TLDGAPVHAW HAFPVQRGQT LTLRVAQGGV RAYLCVAGGI DVPEMMGSRA TDLKAGFGGF EGRPLRDGDR LAALPADRSH APDVSGAAIG VKAPRWTFDR MRGELPVMRV LPGPEYDDFL ADSQAAFWES EWTLTPNSNR MGFRLQGPEL VRRQLCSGDL LSHGVVPGVI QVPPSGQPIV LMADAQTTGG YPKIGTVILA DQWRLAQVPL GTRIRFARAT LEEAEAARAD VSRYLQQIET ALDWQRRGIL SVARRTARTR PMA
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