Gene RSc2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2170 
Symbol 
ID1221014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2352813 
End bp2353874 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content73% 
IMG OID637238568 
Producthypothetical protein 
Protein accessionNP_520291 
Protein GI17546889 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.723282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGC CCACTTCCCG CGCCGCGCCG GCCTTGATCG AGATCGTGCG GGCCGGCGTG 
CTGACGTCGG TGCAGGACCT CGGCCGCACC GGCTATCGCC GCTTCGGCGT GTGCATGTCG
GGCGCTCTCG ACCCGCTGTC GCTGTACGTC GGCAACCGGC TGGTGGGCAA CCGCAGCGAT
GCGGCCGGCA TCGAGTTCAC GCTGGGCCAC GCCACGCTGC GGTTTCTGGC CGACGGGCTG
GTCGCCCTGA CCGGGGCCGA CTGCCTCGCC ACGCTGGATG GGGCGCCCGT CCATGCCTGG
CATGCCTTTC CCGTGCAGCG CGGCCAGACG CTGACGCTGC GCGTGGCGCA GGGCGGCGTG
CGCGCCTACC TGTGCGTGGC CGGCGGCATC GACGTGCCGG AGATGATGGG CTCGCGCGCC
ACCGACCTCA AGGCCGGCTT CGGCGGCTTC GAAGGTCGTC CGCTGCGCGA CGGCGACCGG
CTGGCCGCGC TGCCGGCCGA TCGGTCGCAC GCGCCCGACG TCAGCGGCGC CGCGATCGGC
GTGAAGGCGC CGCGCTGGAC CTTCGACCGC ATGCGTGGCG AGCTTCCGGT GATGCGCGTG
CTGCCCGGTC CCGAGTACGA CGATTTCCTG GCCGATTCGC AGGCCGCGTT CTGGGAATCG
GAGTGGACGC TCACCCCCAA CAGCAACCGC ATGGGCTTTC GCCTGCAGGG GCCGGAACTC
GTGCGCAGGC AGCTGTGCAG CGGCGACCTG CTGTCGCACG GCGTGGTGCC GGGCGTGATC
CAGGTGCCGC CGTCCGGCCA GCCGATCGTG CTGATGGCCG ACGCGCAGAC CACCGGCGGC
TACCCGAAGA TCGGCACCGT CATCCTGGCC GACCAGTGGC GCCTGGCGCA GGTGCCGCTC
GGCACGCGCA TCCGCTTTGC CCGCGCGACG CTGGAAGAGG CCGAGGCCGC GCGCGCCGAC
GTGTCGCGCT ACCTGCAGCA GATCGAGACG GCGCTGGACT GGCAGCGCCG GGGCATCCTG
TCGGTGGCGC GGCGCACCGC CAGGACACGC CCGATGGCTT GA
 
Protein sequence
MSRPTSRAAP ALIEIVRAGV LTSVQDLGRT GYRRFGVCMS GALDPLSLYV GNRLVGNRSD 
AAGIEFTLGH ATLRFLADGL VALTGADCLA TLDGAPVHAW HAFPVQRGQT LTLRVAQGGV
RAYLCVAGGI DVPEMMGSRA TDLKAGFGGF EGRPLRDGDR LAALPADRSH APDVSGAAIG
VKAPRWTFDR MRGELPVMRV LPGPEYDDFL ADSQAAFWES EWTLTPNSNR MGFRLQGPEL
VRRQLCSGDL LSHGVVPGVI QVPPSGQPIV LMADAQTTGG YPKIGTVILA DQWRLAQVPL
GTRIRFARAT LEEAEAARAD VSRYLQQIET ALDWQRRGIL SVARRTARTR PMA