| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2166 |
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| Symbol | |
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| ID | 1221010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2349179 |
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| End bp | 2350198 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238564 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_520287 |
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| Protein GI | 17546885 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.362822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCC AGATGACGGG CGGACGTGCC ATGCCGGCAC GCCGCCTTCT TTGTGTTTTC
GCGGGAGCGC TCTCGCTCCT GTCGGCCGTC CACGCGCACG CCGAAACGTT CCGCGTCGCC
ACGGCGTATC CGGCGACCAA CTTCCACACG CAGAACCTGC AGGCCTTCGC CGGCGCCGTT
GGCCCGGCCA CCGGCGGCGA GCTCAGGCTG GAGGTCTACC CGAGCGGCAC GCTGCTCAAG
CCCGCCGCCA TCTTCGACGG CGTGAAGGAG GGCAAGGCCG AAGGGGGCGA GGTGATGCTG
TCCACGCTGG CGCAGCGCGA CCCGATGTTC GGCGTCGACT CGATTCCGTT CCTGGTCGAG
AACTACAACG ATGCCCGCCT GCTGTGGGAG GCGTCGCGCC ACAAGATCGA GTCGCTGATG
AAGGCCAGCG GCCTGCGCCT GCTGTACGCC GTGCCCTGGC CGCCGCAGAA CCTGTATTCC
AGCACGCCGA TCGCCCGCCT GTCCGACCTC AGGGGCCATC GCCTGCGCAC CTACAATGCC
GAGCAGAAAC GCATCGCCGA TCTGTACGGC GCGCAGCCCA TCCCGGTGGA AGCCGCCGAT
CTGGGCGCCG CGATCACCGC CGGCCGCATC GACACCATGC TGACCTCGCC GTCGACCGGC
CTCGAGACCC GGGCGGGCCA GCGCCTGACC TACTATTACA AGGTCAACGC GTGGATTCCC
AAGAACGCCG TGTTCGTCAG CGAAGCGCGC TTCGCCAGGC TGTCGCCCGC CGCGCAGCAG
GCGGTGCTGA AGCTCGCCGC GGAATACGAA AAGCGCGGCT GGGAAGCGAG CCGCCAGACC
TACGAGCGCG ATGAGGTCGA GCTCGCCAAG ACCGGCGTGC GCGTCATCAA TCCCGATGTG
ACGCTGCTGG GCGACATGCG CCGCCTCGGC GAACGCCTGA CGCGCGAATG GCTGCGCTCC
GTCGGGACCG AAGAGGTCGA CATCCTGCTG TCCTACGAGC ACAAGCGCAA GCTCAACTGA
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| Protein sequence | MSSQMTGGRA MPARRLLCVF AGALSLLSAV HAHAETFRVA TAYPATNFHT QNLQAFAGAV
GPATGGELRL EVYPSGTLLK PAAIFDGVKE GKAEGGEVML STLAQRDPMF GVDSIPFLVE
NYNDARLLWE ASRHKIESLM KASGLRLLYA VPWPPQNLYS STPIARLSDL RGHRLRTYNA
EQKRIADLYG AQPIPVEAAD LGAAITAGRI DTMLTSPSTG LETRAGQRLT YYYKVNAWIP
KNAVFVSEAR FARLSPAAQQ AVLKLAAEYE KRGWEASRQT YERDEVELAK TGVRVINPDV
TLLGDMRRLG ERLTREWLRS VGTEEVDILL SYEHKRKLN
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