Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2149 |
Symbol | |
ID | 1220991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2332231 |
End bp | 2333262 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637238545 |
Product | hypothetical protein |
Protein accession | NP_520270 |
Protein GI | 17546868 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000536767 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCCG TCTCCCGGCT GGTCAATGCG TTGATCCCGA CCAGCCTGGG CCGCCCGGCC TGGCCGCCGA AACCGGTCAA GCCGGCCAGG CCCGCCACCC GGCGCCCCCG CCCGGCCGTC ACACCGACCC CGACCGCCGG CACCTTCGTG CGCGAACGCT TCATCTACGA GCCGGAATCT CCCGCCGTGG TGGCCCGTCG GCCCGAGTAC TGGCTGTACA CGCCGCCCTC GCGCGGCAGC ACGCCACCCG CGCTGATGGT GATGCTGCAT GGCTGCAAGC AGTCGGCCGA GGCGCTTGCC CACGGTACGC GCATGAACGC GCTGGCCGAC CGCGAAGGCT TCATCGTGCT GTACCCCGAG CAGCCGCGCC GCGCGCATCC GCAATGCTGC TGGCACTGGT ATGACCCCGA ACACGCCGGT GCGCACGAAG CGGATGACCT TGCCCGGCTC GTGGCGCAAA CCCTGACCGA GACCGGCGCC GACCCCTCGC GCGTCTATCT CGCGGGGCTG TCCGCGGGTG CCGGGCTGGC CGGGCTGATG GCGCTGCGGC ACCCTCACCT GTTCGCCGCC CTGGCCCTGC ACTCCGGACC GGTGCTCGGC GTCGCCCGCA CGGCCGCCTC GGCGCTGAAC CTCATGCGGC GGGGCGCGCG CATCGACCCC GTCGAAGCCC TGGCCACGAT GGTCGACACC GGCACCTATC CCGGTATCCC GACGCTGCTG CTGCACGGTC TGCGCGACGA GGCCGTCAGT CCTGTCAACC AGGCCCAGCT GGCAACCCAG TTCCGCGCCC TCAACCATCT GTGCGACGCC GCCGACGTGC GGCGCGAAAC CACGCGCGGC GACGGCTACG TCCTGCGCAG CGATCTGCGC GACGACGCGT GCCTGCTGGC CACCTGCCAG TTCACCAGCA CCGGGCACGC ATGGAGCGGC GGCGATCCGC GCTACGCCTT CCACGCGGCA GGCCCCGATG CGACCTGGCT GTGGTGGCAA TTCGCGCGAC AGCACGCGCG CACCACCGCA CCCGCCACCT GA
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Protein sequence | MKSVSRLVNA LIPTSLGRPA WPPKPVKPAR PATRRPRPAV TPTPTAGTFV RERFIYEPES PAVVARRPEY WLYTPPSRGS TPPALMVMLH GCKQSAEALA HGTRMNALAD REGFIVLYPE QPRRAHPQCC WHWYDPEHAG AHEADDLARL VAQTLTETGA DPSRVYLAGL SAGAGLAGLM ALRHPHLFAA LALHSGPVLG VARTAASALN LMRRGARIDP VEALATMVDT GTYPGIPTLL LHGLRDEAVS PVNQAQLATQ FRALNHLCDA ADVRRETTRG DGYVLRSDLR DDACLLATCQ FTSTGHAWSG GDPRYAFHAA GPDATWLWWQ FARQHARTTA PAT
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