| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2148 |
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| Symbol | |
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| ID | 1220990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2331458 |
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| End bp | 2331940 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637238544 |
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| Product | LysM domain/BON superfamily protein |
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| Protein accession | NP_520269 |
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| Protein GI | 17546867 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00099645 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTTT TTGATTTCAT CAAGGAAGCT GGCGAAAAAC TGTTCCACGG CGGCGCAGCG
GCACCGGCCG ATGCCTCGGC GGATGCGGAT GCGGCCGAGG CTGCGAATCG CGCCAAGGGC
GAAGCCATCG AGCAATACAT CGCTCAGCAG GGCCTGACTG CCACCGCATT GTCGGTGCAG
GTGGACGGCG ATCAGGCCAA GGTGTTCGGG GTGGCGGCCG ACCAGGCGAC GCGCGAGAAG
ATCATCCTGT GCTGCGGTAA CGTGACGGGC ATCCAGTCCG TCGACGACCA GATGTCGGTC
AGCACGCAGG CGCCGGAGTC GCAGTGGCAT ACGGTGGCCT CGGGCGACAC GCTGTCGGCC
ATCGCCAAGA AGTTCTATGA CGATGCCAAC AAGTACCCGG TGATTTTCGA GGCCAACAAG
CCGATGCTGT CGGACCCGAA CCGGATCTAT CCGGGGCAGA AGCTGCGCAT TCCGGCGGTG
TAA
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| Protein sequence | MGFFDFIKEA GEKLFHGGAA APADASADAD AAEAANRAKG EAIEQYIAQQ GLTATALSVQ
VDGDQAKVFG VAADQATREK IILCCGNVTG IQSVDDQMSV STQAPESQWH TVASGDTLSA
IAKKFYDDAN KYPVIFEANK PMLSDPNRIY PGQKLRIPAV
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