| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2145 |
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| Symbol | agaZ |
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| ID | 1220987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2327924 |
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| End bp | 2329279 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238541 |
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| Product | putative tagatose 6-phosphate kinase protein |
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| Protein accession | NP_520266 |
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| Protein GI | 17546864 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4573] Predicted tagatose 6-phosphate kinase |
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| TIGRFAM ID | [TIGR02810] D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000526082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGCC TGACGAACAC GCTCGAACGC CCGCGTGCCT CGCACACCGA GGCGGTGCTG
CGCGTGATCT TCGACGCGAA TCGCGGGGAC GCGCAGCGCG GCATCTATTC GGTCTGCAGT
GCGCACACCT TCGTGCTCGA AGCGGCGTGT GAAGCGGCGC GCGCGGATGG TTCGCCGCTC
CTGATCGAAG CCACCTGCAA CCAGGTCAAC CATCTCGGCG GCTATACCGG GATGACGCCG
GCCGATTTTC GTCGCGACGT CGAGGCGATT GCCGAGCGTT GCGGGCTCGC TGCCTCGGCG
CTCGTGCTCG GTGGCGACCA TCTCGGCCCG AATCCATGGC GCGACCGTCC GGCAGCCGAG
GCGATGCACG AGGCGCAGAC CATGGTTGCG GCGTATGTCG AGGCCGGCTT CACGAAGATC
CATCTCGATG CGAGCATGGC TTGCGCCGAC GATGCCAGCC CGCTCGACGA TCGCACGATC
GCGGATCGCG CCGCGCGGCT GTGCCGTGTC GCCGAGGCGG CCGCCGCGCG CGTGGGCACG
CGGCCGGTCT ATGTCATCGG CACCGAGGTG CCGACACCGG GCGGCGAGAC CGGCGGTGAC
GCGGACGGTG TCAGCGGGAT CGCACGGATC GCGGTCACAC AGGCGGACAG CATCGCGGCG
ACGCTTGCAG CCCACCGCGA GGCGTTCGAT GCGCTCGGCC TGCAGGATGT GTGGACGCGC
GTGATCGCGA TCGTCGCCCA GCCGGGTGTC GATTTCGACG ACCGCCACGT GCTCGACTAC
GACAGCGACA AGGCCGCGGC GCTCAGCGCG AGCATCCTGC GCACGCCGGG GCTCGTGTTC
GAAGCGCACT CGACCGACTA CCAGACCGAC GCGGCGCTCA CCGCGCTCGT GCGCGACCAT
TTCGCGATCC TGAAGGTCGG CCCGGCGCTG ACGTTTGCGC TGCGCGAGGC GCTGTTCGCG
CTCAGCTATA TCGAGGACGC GCTGATCGAC GATCCTGCGC AGCGTTCGCG GTTGCGCGAG
GTCGTCGACG CGGCGATGTG CGCGCAGCCC GGCTACTGGG CACCGTACTA TCGCGGCGAC
GCTGCCGCGC AGTCGCTTGC GCGGCGGTTC AGCTACAGCG ACCGCATCCG CTATTACTGG
CCGCAGCCGC GGGTCGCGGC CGCGGTCGAG CGGCTGCTGG CCAACCTCGA TGCTCAGCGC
GTGCCCGAGA CGCTGGTCGC GCAGTGGCTG CCCGACGTGT ACGCGGCGTT CCGGAAGGGC
ACGCTTGCGC CGGACCCGCG CGCGTGGGTC CGCCACCGGA TTCGCGACGT GATTGCGCGG
TATGCGCGCG CGTGTGGAAT GCACTGGTCG GGCTGA
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| Protein sequence | MPGLTNTLER PRASHTEAVL RVIFDANRGD AQRGIYSVCS AHTFVLEAAC EAARADGSPL
LIEATCNQVN HLGGYTGMTP ADFRRDVEAI AERCGLAASA LVLGGDHLGP NPWRDRPAAE
AMHEAQTMVA AYVEAGFTKI HLDASMACAD DASPLDDRTI ADRAARLCRV AEAAAARVGT
RPVYVIGTEV PTPGGETGGD ADGVSGIARI AVTQADSIAA TLAAHREAFD ALGLQDVWTR
VIAIVAQPGV DFDDRHVLDY DSDKAAALSA SILRTPGLVF EAHSTDYQTD AALTALVRDH
FAILKVGPAL TFALREALFA LSYIEDALID DPAQRSRLRE VVDAAMCAQP GYWAPYYRGD
AAAQSLARRF SYSDRIRYYW PQPRVAAAVE RLLANLDAQR VPETLVAQWL PDVYAAFRKG
TLAPDPRAWV RHRIRDVIAR YARACGMHWS G
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