| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2144 |
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| Symbol | |
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| ID | 1220986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2326547 |
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| End bp | 2327872 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238540 |
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| Product | sugar-binding periplasmic signal peptide protein |
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| Protein accession | NP_520265 |
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| Protein GI | 17546863 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000125903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACACA AGACGCTAAC CGCCGCCGCG CGTTTCGCTG CCGGTGCGGC GATCGCCACC
GCCGCGTGGG CCACGCAGGC GGCGACGCTG ACGATTGCGA CGCTGAACAA TCCGGACATG
CTCGAGCTGA AGAAGCTGTC CGCGACGTTC GAGAAGAACC ATCCCGACAT CAAGCTGAAC
TGGGTGATTC TCGAAGAGAA CGTGCTGCGC CAGCGCGCGA CCACCGACAT CACGACCGGC
AGCGGCCAGT TCGACGTCAT GGCGATCGGC ACCTACGAGA CGCCGCTGTG GGGCAAGCGC
GGCTGGCTCG CGCCGATGGC GAACCTGCCG GCCGACTACG ATCTGGCCGA CGTGATCAAG
ACCGCGCGCG ACAGCCTGTC GTACGACGGC CAACTGTATG CGCTGCCGTT CTACGTCGAG
AGCTCGATGA CGTTCTACCG CAAGGATCTG TTCGCGGCGA AGGGCCTCAC GATGCCGGAT
CAGCCGACCT ACGATCAGAT CGCGCAGTTC GCGGACAAGC TGACCGACAA AGACAAGGGG
GTGTACGGCA TCTGCCTGCG CGGCAAGGCA GGCTGGGGCG AGAACATGGC CTATGTGTCG
ACGGTCGTGA ACACCTTCGG CGGCCGCTGG TTCGACGAGA AGTGGAACGC GCAGCTGACC
TCGCCCGAAT GGAAGAAGGC GATCGGCTTC TACGTGAACC TGCTGAAGAA GAACGGCCCG
CCGGGCGCGA GTTCGAACGG CTTCAACGAG AACCTGACGC TGACGGCATC GGGCAAGTGC
GCGATGTGGA TCGATGCGAC AGTCGCGGCC GGCATGCTCT ATAACAAGCA GCAGTCGCAG
GTCGCGGACA AGATCGGTTT TGCCGCCGCG CCGATCGCCG ACACGCCAAA GGGTTCGCAC
TGGCTGTGGG CGTGGGCGCT TGCGATCCCG AAGACGTCGA AGCAGCAGGA GGCCGCGAAG
ACATTCGTCA CGTGGGCGAC ATCGAAGCAG TACATCGAGA TGGTCGGCAA GGATGAAGGC
TGGGCCTCGG TGCCGCCGGG CACGCGCGCG TCGACGTATC AGCGCGCCGA GTACAAGGCT
GCCGCGCCGT TCTCCGACTT CGTGCTGCGT GCGATCGAGA CCGCCGATCC GACCGATCCG
TCGGCCAAGA AGGTGCCGTA CACGGGCGTC GCGTATGTCG GGATCCCGGA GTTCCAGTCG
TTCGGCACGG TGGTCGGCCA GAGCATCGCG GGCGCGGTTG CCGGGCAGTT CTCGGTCGAT
CAGGCGCTTG CCGCAGGACA GGCGGCCGCC GATCGCTCGG TGCGGCAGGG CGGTTACCAG
AAGTGA
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| Protein sequence | MQHKTLTAAA RFAAGAAIAT AAWATQAATL TIATLNNPDM LELKKLSATF EKNHPDIKLN
WVILEENVLR QRATTDITTG SGQFDVMAIG TYETPLWGKR GWLAPMANLP ADYDLADVIK
TARDSLSYDG QLYALPFYVE SSMTFYRKDL FAAKGLTMPD QPTYDQIAQF ADKLTDKDKG
VYGICLRGKA GWGENMAYVS TVVNTFGGRW FDEKWNAQLT SPEWKKAIGF YVNLLKKNGP
PGASSNGFNE NLTLTASGKC AMWIDATVAA GMLYNKQQSQ VADKIGFAAA PIADTPKGSH
WLWAWALAIP KTSKQQEAAK TFVTWATSKQ YIEMVGKDEG WASVPPGTRA STYQRAEYKA
AAPFSDFVLR AIETADPTDP SAKKVPYTGV AYVGIPEFQS FGTVVGQSIA GAVAGQFSVD
QALAAGQAAA DRSVRQGGYQ K
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