| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2142 |
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| Symbol | |
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| ID | 1220984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2324646 |
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| End bp | 2325506 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238538 |
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| Product | transmembrane ABC transporter protein |
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| Protein accession | NP_520263 |
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| Protein GI | 17546861 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000847847 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG GGATGCTCGA TATGCGCCGT GCGGGCGGCC CGCCGAACGT GTTTGGCGCG
GTGCGGCGCG CGCTGCCGGG CGTGCTCGCC TGGTTGATCG CGCTGGCGCT GTTTTTCCCG
ATCTTCTGGA TGGCGATCAC CGCGTTCAAG ACCGAGCAGC AGGCCTACGA GGCATCGCTG
TTCTTCGTGC CGACGCTCGA CAGCTTCCGG GAGGTGTTCG CGCGCAGCAA CTACTTCGCG
TTCGCCTGGA ATTCGGTGCT GATCTCGGCC GGCGTAACGG TCATCTGCCT CGCGCTCGCG
GTGCCCGCCG CGTATGCGAT GGCCTTCTTC CCGAACCGCC GCACGCAGAA GGTGCTGCTG
TGGATGCTGT CGACGAAGAT GATGCCGTCG GTCGGCGTGC TCGTGCCGAT CTATCTGCTG
TGGAAGAACG CCGGGCTGCT CGATACGGTC TCCGGGCTCG TCATTGTCTA TGCGCTGATC
AACCTGCCGA TCGCGGTGTG GATGGCGTTC ACCTACTTCA ACGAGATCCC GAAGGACATC
CTCGAGTCGG GGCGGATCGA CGGCGCATCG ACGTGGCAGG AGATCGTCTA CCTGCTGATG
CCGATGGCGC TGCCGGGCCT GGCGTCGACC GCGCTCCTGC TCGTCATCCT GTCGTGGAAC
GAGGCGTTCT GGAGCATCAA CCTGTCGAGC TCGAATGCGG CGCCGCTGAC CGTGTTCATC
GCGTCGTACT CGAGTCCGGA GGGGCTGTTC TGGGCGAAGC TGTCGGCCGC GTCGCTGCTG
GCGGTGGCGC CGATCCTGGT GGTCGGCTGG CTGTCGCAGA AGCAGCTGGT TCGCGGGCTC
ACGTTCGGAG CGGTCAAATG A
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| Protein sequence | MSDGMLDMRR AGGPPNVFGA VRRALPGVLA WLIALALFFP IFWMAITAFK TEQQAYEASL
FFVPTLDSFR EVFARSNYFA FAWNSVLISA GVTVICLALA VPAAYAMAFF PNRRTQKVLL
WMLSTKMMPS VGVLVPIYLL WKNAGLLDTV SGLVIVYALI NLPIAVWMAF TYFNEIPKDI
LESGRIDGAS TWQEIVYLLM PMALPGLAST ALLLVILSWN EAFWSINLSS SNAAPLTVFI
ASYSSPEGLF WAKLSAASLL AVAPILVVGW LSQKQLVRGL TFGAVK
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