| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2125 |
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| Symbol | pepN |
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| ID | 1220966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2302444 |
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| End bp | 2305161 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238520 |
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| Product | aminopeptidase N |
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| Protein accession | NP_520246 |
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| Protein GI | 17546844 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCA CCGATACCGC CGTGACGATC TACCGCCAGG ACTACACCGC CCCCGCCTTC
CGCATCGACG ACGTGGCGCT GGAAATCGAC CTGGTGCCCG AGCGCACCCG CATCGTCAGC
CGCCTGCGCA TGACGCGCCT GCGCGCCGGC GCCCCGCTCA CGCTGGTCGG CGAAGGCCTG
GAGCTGGCGG GCGTCACGCT CGATGGCCAG GCCCTGCCCG GCATCCAGCC CGACGGCGAC
ACGCTCACCA TCGAAGCGGC CCCTGCCCAG GCCGATACCG CCTTCACGCT GGAGCTCACC
ACCTTCTGCA ACCCCGCGGC CAATTCGTCG CTGATGGGGC TGTATGTCTC CAACGACAAC
TTCTTCACGC AGTGCGAAGC CGAGGGCTTC CGCAAGATCA CCTACTTCCT CGACCGGCCC
GACGTGATGG CGGTCTACAC CGTCACCCTG CGCGCCGCCA AGGCAGACTA CCCGGTGCTG
CTGTCCAACG GCAACCTGGT CTCCCAGCGC GATCTGCCGG ACGGACGCCA CGAGGCCGTC
TGGCACGACC CGTTCAAGAA GCCGTCGTAC CTGTTCGCGC TGGTGGCGGG CACGCTCGAA
TGCATCGAGG CGCGCATCCT GTCCGCCTCG GGCAAGGAGA AGCTGCTGCA GGTCTGGGTC
GAGCCGCACG ACCTGGGCAA GACCCGCCAT GCGATGGATT CGCTCATCCA CGCCATCCGC
TGGGACGAAC AGCGCTTCGG CCTGGAGCTG GACCTGGACC GCTTCATGAT CGTCGCCGTG
GGCGACTTCA ACATGGGCGC GATGGAGAAC AAGGGCCTGA ACATCTTCAA CACGAAGTAC
GTGCTGGCCA ATGCCGAGAC CGCCACCGAC GTCGACTTCG CCAATATCGA ATCGGTGGTC
GGGCACGAGT ACTTCCACAA CTGGACCGGC AACCGCGTCA CCTGCCGCGA CTGGTTCCAG
CTGAGCCTGA AGGAAGGCCT GACGGTGTTC CGCGACCAGG AGTTCTCGGC CGACATGGCC
GCGCAGGCGG CGGCGCAGGC CGGCAACGCA GCGGCCGCCG CCAGCGCCCG CGCCGTCAAG
CGCATCGAAG ACGTGCGCCT GCTGCGCCAG GTGCAGTTTC CGGAAGACGC CGGCCCCATG
GCCCACCCGG TGCGCCCCGA CAGCTACGAA GAGATCAACA ACTTCTACAC CGTCACGGTG
TACGAGAAAG GCGCCGAAGT CGTGCGCATG TACCAGACCC TGCTGGGCCG CGAGGCTTTC
CGCAAAGGCA TGGACCTGTA CTTCCAGCGC CACGACGGCC AGGCCGTCAC CTGCGACGAC
TTCCGCGCCG CCATGGCCGA CGCCAACGGC CGCGACCTGA CCCGGTTCGG CCGCTGGTAC
AGCCAGGCCG GCACGCCGGT CGTCGCGGTC GAAGGCCGCC ATGACGCGGC CACCCGCACC
TACACGCTCA CGCTGCGCCA GCGCTGCGAG CCGGTCGGCA TCGAAACCGC CGACGGCAGC
CTGCACAAGC AGCCCTTCCA CATCCCCTTC GCCATCGGCC TGCTCGATGC GCAGGGCCGC
GACCTGCCGC TGCGCCTGCG CGGCGAGCCG GCCTCCGCCC AGCCGCTCAC CACGCGCGTG
CTGGACTTCA CCGAAGCCGA GCAGACCTTC GTCTTCGAGG ACGTGGCCGA GGCCCCGCTG
CCGTCGCTGC TGCGCAATTT CTCCGCGCCG GTCGTCGTCG AATACGGCTA CACCACCGGG
CAGCTGACCT TCCTGCTGGC GCACGACGCC GACCCGTTCA ACCGCTGGGA AGCCGGCCAG
CGCCTGGCCA CCGACGCGCT GCTGCGCATG GTGGCCGACG TGCAGCAGGG CCGCACCCCG
CAGGTCGACC CGGCCCTGGT GGAGGCGCTG CGCGCCGTGC TGGCCGATGC CTCGCTCGAC
CCGGCCTTCC GCGAGCAGAT GCTGATCCTG CCCGCCGAGA CCTACCTGGC CGAACGCATG
GACGTGGCCG ACCCGGCCGC CATCCACGTC GCCCGCCGCG CGCTGCGCCG CACGCTGGCC
GAAGCGCTCG GCGCCGAGTT CCTGCGCGCC TATCACGACA GCACGACCGA CGGCCCCTAC
ACGCCCGATG CCGTGTCGGC CGGCAAGCGC GCGCTCAGGA ACATCGCCCT GGGCTACCTG
GCCGAGGCCG AATCGGCCGA GGCGCTGGCC CTGGCCGAGC AGCAATACAC CAGCGCCGCC
AGCATGACCG ACCGCATGGG CGCGCTCGCG GCGCTGGTCA ACAGCTACGC CCCGGGCCGC
GAAGCCGCGC TGGCCGACTT CTACACCCGC TTCGCCGACG ACGCGCTGGT CATCGACAAG
TGGTTCGCGC TGCAAGCCAT GCAGCCGGGC GCCGCGGGCA AGCCGACGCT GGCCACCGTG
CGCGCGCTGA TGGCGCACCC GGCCTTCACG CTGCGCAACC CGAACCGCGC GCGCGCGCTG
ATCTTCAGCT TCTGCTCCGG CAACCCGGCG CAGTTCCACG CCGCCGACGG GTCCGGCTAC
GCCTTCTGGG CCGAGCAGGT GCTGGCGCTC GATGCCATCA ACCCGCAGGT ATCGGCGCGG
CTGGCGCGCT CGCTGGACCG CTGGCGCAAG TACGTTCCCG CCCTGCGCGA GGCGATGCAC
GACGCGCTCA AGCGCGTGGC CGCGCATCCG AGCCTGTCGC GCGACGTGCG CGAGATCGTC
GGCAAGGCGC TGGCGTGA
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| Protein sequence | MLRTDTAVTI YRQDYTAPAF RIDDVALEID LVPERTRIVS RLRMTRLRAG APLTLVGEGL
ELAGVTLDGQ ALPGIQPDGD TLTIEAAPAQ ADTAFTLELT TFCNPAANSS LMGLYVSNDN
FFTQCEAEGF RKITYFLDRP DVMAVYTVTL RAAKADYPVL LSNGNLVSQR DLPDGRHEAV
WHDPFKKPSY LFALVAGTLE CIEARILSAS GKEKLLQVWV EPHDLGKTRH AMDSLIHAIR
WDEQRFGLEL DLDRFMIVAV GDFNMGAMEN KGLNIFNTKY VLANAETATD VDFANIESVV
GHEYFHNWTG NRVTCRDWFQ LSLKEGLTVF RDQEFSADMA AQAAAQAGNA AAAASARAVK
RIEDVRLLRQ VQFPEDAGPM AHPVRPDSYE EINNFYTVTV YEKGAEVVRM YQTLLGREAF
RKGMDLYFQR HDGQAVTCDD FRAAMADANG RDLTRFGRWY SQAGTPVVAV EGRHDAATRT
YTLTLRQRCE PVGIETADGS LHKQPFHIPF AIGLLDAQGR DLPLRLRGEP ASAQPLTTRV
LDFTEAEQTF VFEDVAEAPL PSLLRNFSAP VVVEYGYTTG QLTFLLAHDA DPFNRWEAGQ
RLATDALLRM VADVQQGRTP QVDPALVEAL RAVLADASLD PAFREQMLIL PAETYLAERM
DVADPAAIHV ARRALRRTLA EALGAEFLRA YHDSTTDGPY TPDAVSAGKR ALRNIALGYL
AEAESAEALA LAEQQYTSAA SMTDRMGALA ALVNSYAPGR EAALADFYTR FADDALVIDK
WFALQAMQPG AAGKPTLATV RALMAHPAFT LRNPNRARAL IFSFCSGNPA QFHAADGSGY
AFWAEQVLAL DAINPQVSAR LARSLDRWRK YVPALREAMH DALKRVAAHP SLSRDVREIV
GKALA
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