Gene RSc2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2118 
Symbol 
ID1220959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2294273 
End bp2295679 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content69% 
IMG OID637238513 
Productputative xanthine permease transmembrane protein 
Protein accessionNP_520239 
Protein GI17546837 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.261398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA CCCTCGCCGC CCCGCCGGCG GACCTGACCA ACGAGCGCGT CGCCTATGCC 
CGCCTGTTCG CCCTCGGCCT GCAACATGTC CTGGTGATGT ATGCAGGCAC CGTGGCGGTG
CCGCTGATCG TGGGCAGCGC ACTGCATCTG CCCAAGGAGC AGCTCGCCTT CCTGATCAAC
GCCGACCTGT TCGCCGCCGG CGTGGCGACG CTGATCCAGT CCCTGGGCGT GTGGAAGTTC
GGCATCCGCA TGCCGGTGAT GATGGGCGTG ACGTTCGCCT CGGTGGGCCC GATGATCGCC
ATCGGCGGCG ACCCGGGCAT CGGCCTGCTG GGCATCTACG GCGCGGTCAT CGCGGCGGGG
CTGTTCGGCA TCGTAATCGC GCCGCTGATG GGGCGCGTGC TGGGGCTGTT CCCGCCGGTG
GTGACCGGCA CCGTCATCAC GCTGATCGGC GTGTCGCTGA TGGGCGTGGG CATCAACTGG
GCCGCGGGCG GCCAGCCCAC CCTCCAGGCC ATGGTGGACG GCGTGCTCAG GACCGTGCCC
AACCCGGCCT ACGGCGACCC GGGCGGCCTG GCGATCGCGC TGTCGGTACT GGTCATCATC
CTGCTGCTGA CCAAGTACGG ACGCGGCCTG ATCGGCAACA TCGCAGTGCT GCTGGGCGTC
GCCTGCGGCA CCCTGATCGC CATGGCGGCC GGCAAGGTCA GTTTCGCGGG CGTGGCCGAC
GCCGACTGGA TGGCCGTCAT CACGCCGCTG CACTTCGGCA TGCCGACCTT CCACGCCGGC
GCCGTCGCCT CGATGTGCGT GGTGATGCTG ATCACGCTGG TGGAATCGAC CGGCATGTTC
CTGGCGCTGG CCGAGATCAC CGGCAAGACG CTCACGCATG ACGACCTGAC CCGCGGCCTG
CGCGCCGACG GCCTGGGCTC GGTGATCGGC GGCCTGTTCA ACACCTTTCC CTACACCTCG
TTCTCGCAGA ACGTCGGGCT GGTGACCGTC ACCGGCGTGC GCTCGCGCTT CGTGGCGGCG
GCCGGCGGCG TGATCCTGAT CGCGCTGGGG CTGTTCCCGA AGATGGCGCA CGTGGTGGCC
TCGGTGCCCG CCTTCGTGCT GGGCGGCGCG GGCATCGTGA TGTTCGGCAT GGTGGCCGCC
ACGGGCGTGC GCATCCTCGG CTCGATCGAC TTCAACCGGC ATCGCCACAA CCTGTTCATC
GTGGCCATCG CGATCGGCTT CGGCATGATC CCGACGCTGG CGCCGGCCTT CTTCCAGTAC
CTGCCGCGCT GGCTGGAGCC GGTCACGCAC AGCGGCATCG TGCTGGGCAC GCTGGTGGCG
GTGATCCTGA ACCTGTACTA CAACGGCATG CAGCCGGCCG AGCACGCCAT GCGCGCGGCC
GCGGCCACCA CGCACAGCGC GGAGTGA
 
Protein sequence
MASTLAAPPA DLTNERVAYA RLFALGLQHV LVMYAGTVAV PLIVGSALHL PKEQLAFLIN 
ADLFAAGVAT LIQSLGVWKF GIRMPVMMGV TFASVGPMIA IGGDPGIGLL GIYGAVIAAG
LFGIVIAPLM GRVLGLFPPV VTGTVITLIG VSLMGVGINW AAGGQPTLQA MVDGVLRTVP
NPAYGDPGGL AIALSVLVII LLLTKYGRGL IGNIAVLLGV ACGTLIAMAA GKVSFAGVAD
ADWMAVITPL HFGMPTFHAG AVASMCVVML ITLVESTGMF LALAEITGKT LTHDDLTRGL
RADGLGSVIG GLFNTFPYTS FSQNVGLVTV TGVRSRFVAA AGGVILIALG LFPKMAHVVA
SVPAFVLGGA GIVMFGMVAA TGVRILGSID FNRHRHNLFI VAIAIGFGMI PTLAPAFFQY
LPRWLEPVTH SGIVLGTLVA VILNLYYNGM QPAEHAMRAA AATTHSAE