Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2118 |
Symbol | |
ID | 1220959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2294273 |
End bp | 2295679 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238513 |
Product | putative xanthine permease transmembrane protein |
Protein accession | NP_520239 |
Protein GI | 17546837 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03173] xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.261398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCA CCCTCGCCGC CCCGCCGGCG GACCTGACCA ACGAGCGCGT CGCCTATGCC CGCCTGTTCG CCCTCGGCCT GCAACATGTC CTGGTGATGT ATGCAGGCAC CGTGGCGGTG CCGCTGATCG TGGGCAGCGC ACTGCATCTG CCCAAGGAGC AGCTCGCCTT CCTGATCAAC GCCGACCTGT TCGCCGCCGG CGTGGCGACG CTGATCCAGT CCCTGGGCGT GTGGAAGTTC GGCATCCGCA TGCCGGTGAT GATGGGCGTG ACGTTCGCCT CGGTGGGCCC GATGATCGCC ATCGGCGGCG ACCCGGGCAT CGGCCTGCTG GGCATCTACG GCGCGGTCAT CGCGGCGGGG CTGTTCGGCA TCGTAATCGC GCCGCTGATG GGGCGCGTGC TGGGGCTGTT CCCGCCGGTG GTGACCGGCA CCGTCATCAC GCTGATCGGC GTGTCGCTGA TGGGCGTGGG CATCAACTGG GCCGCGGGCG GCCAGCCCAC CCTCCAGGCC ATGGTGGACG GCGTGCTCAG GACCGTGCCC AACCCGGCCT ACGGCGACCC GGGCGGCCTG GCGATCGCGC TGTCGGTACT GGTCATCATC CTGCTGCTGA CCAAGTACGG ACGCGGCCTG ATCGGCAACA TCGCAGTGCT GCTGGGCGTC GCCTGCGGCA CCCTGATCGC CATGGCGGCC GGCAAGGTCA GTTTCGCGGG CGTGGCCGAC GCCGACTGGA TGGCCGTCAT CACGCCGCTG CACTTCGGCA TGCCGACCTT CCACGCCGGC GCCGTCGCCT CGATGTGCGT GGTGATGCTG ATCACGCTGG TGGAATCGAC CGGCATGTTC CTGGCGCTGG CCGAGATCAC CGGCAAGACG CTCACGCATG ACGACCTGAC CCGCGGCCTG CGCGCCGACG GCCTGGGCTC GGTGATCGGC GGCCTGTTCA ACACCTTTCC CTACACCTCG TTCTCGCAGA ACGTCGGGCT GGTGACCGTC ACCGGCGTGC GCTCGCGCTT CGTGGCGGCG GCCGGCGGCG TGATCCTGAT CGCGCTGGGG CTGTTCCCGA AGATGGCGCA CGTGGTGGCC TCGGTGCCCG CCTTCGTGCT GGGCGGCGCG GGCATCGTGA TGTTCGGCAT GGTGGCCGCC ACGGGCGTGC GCATCCTCGG CTCGATCGAC TTCAACCGGC ATCGCCACAA CCTGTTCATC GTGGCCATCG CGATCGGCTT CGGCATGATC CCGACGCTGG CGCCGGCCTT CTTCCAGTAC CTGCCGCGCT GGCTGGAGCC GGTCACGCAC AGCGGCATCG TGCTGGGCAC GCTGGTGGCG GTGATCCTGA ACCTGTACTA CAACGGCATG CAGCCGGCCG AGCACGCCAT GCGCGCGGCC GCGGCCACCA CGCACAGCGC GGAGTGA
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Protein sequence | MASTLAAPPA DLTNERVAYA RLFALGLQHV LVMYAGTVAV PLIVGSALHL PKEQLAFLIN ADLFAAGVAT LIQSLGVWKF GIRMPVMMGV TFASVGPMIA IGGDPGIGLL GIYGAVIAAG LFGIVIAPLM GRVLGLFPPV VTGTVITLIG VSLMGVGINW AAGGQPTLQA MVDGVLRTVP NPAYGDPGGL AIALSVLVII LLLTKYGRGL IGNIAVLLGV ACGTLIAMAA GKVSFAGVAD ADWMAVITPL HFGMPTFHAG AVASMCVVML ITLVESTGMF LALAEITGKT LTHDDLTRGL RADGLGSVIG GLFNTFPYTS FSQNVGLVTV TGVRSRFVAA AGGVILIALG LFPKMAHVVA SVPAFVLGGA GIVMFGMVAA TGVRILGSID FNRHRHNLFI VAIAIGFGMI PTLAPAFFQY LPRWLEPVTH SGIVLGTLVA VILNLYYNGM QPAEHAMRAA AATTHSAE
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