| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2112 |
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| Symbol | |
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| ID | 1220953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2287104 |
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| End bp | 2288432 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238507 |
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| Product | metabolite transporter |
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| Protein accession | NP_520233 |
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| Protein GI | 17546831 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0151883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.38629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAACA ACGTTTCTAT CGAAGACGTT CCTTTGAATG GCTTCCATCA ACTGCTCAGC
ATTCGATCCG GCGGCGGCTG GGTCCTGGAC GGCTACGTAC TGAGCATCAT CGGCGTGGCC
ATGGTGCAGT TGTCGGCGGC GCTGCATTTG AGCGGCTTCT GGCAAGGCAT GGTTGCGGCC
TCGGCCTTGA TCGGGATTTT CTGCGGAGGC TTCCTGGGCG GGCTGCTGAC CGGATGCCTG
GGCCGCCAGA AGCTGTACTT CTTCGGTCCG ACGATTTTCG TGGTGTGCTC GCTGGCGCAG
TTCTGGGCGG ATTCCGGCGC GGCGCTGTTC TTCTTCCGAT TCCTGATCGG GGTCGGTGTC
GGGTTCGAAT ACCCGGTTGC GGGTTCCTTG CTGGTGGAGT TCATGCCCAG GAAAGATCGA
GGCCCGCGCT TGGCGATGCT GACCATCCTG TGGTTCGCCG GTGCGGCGCT GGCTTACATG
GTGGGCAACG CGATCCTGGA TACCGGGCGT GCCGACGCAT GGAGACTGGT CCTCGCAAGC
CCGGCCGTCA TCGGCGCACT GCTGTTGCTG GTGCGCATCG GGACGCCAGA GTCGCCTCGC
TGGCTGTTGA GCAAAGGGCG GGCAGCGGAG GCCGAGCGCG TCATCCAGCA GGTCTATGGC
CCCCAGTTTT CGCTCGAGAA TCTTCCCGAA CAACGGCCGG AGAAGAAGGT GTCGCTCCTG
AGCCTGCTGC ACTCCGGGTA CGGCAAGCGC ATGCTGTTCG TGTCGGTCTT CTGGAGCTGC
TCGGTGATTC CCGTGTTTGC CGTGTACGCA TTCGCGCCCA CGGTACTGCA GGCGTTGCAT
CTGAAAGGGG CCTGGGCGTC GTTCGGCTCC GTGGCCATCA CGCTGCTGTT CGTGGTCGGC
TGTTTCGTCG CCACGCGGCT GATCAATACC GTCGGCCGCC GCAGCATGCT CATCCATAGC
TTCCTGTGGT CGGGGCTGGC GCTGCTGGGA TTGGGCCTCT TCTGCGACGG CTCGGAAATG
CTGGTGCTCG TGCTGTTCGG TGCCTATGCC GTGTTTATCG GCGGTGCGCA GGTATTGCAG
CTGGTCTATC CGAATGAGCT GTTTCCCACC GAAATCCGGT CGGCCGCGGT GGGCATGGGG
GCCTCGCTGT CGCGCATCGG CGCAGCCATT GGAACGTGGG CGGTCCCCGT CGCGCTGCAG
GGCATTGGTG TCGGCAACAC GATGTTCGCG GCGGCCGGGG TGACGCTGTT CGGCCTGCTG
GTGTCACTGG CCATCGCCCC GGAAACGCGC GCGCTCAGCT TGCAGGAGGC GGCTTCGCTC
AGTCGCTAG
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| Protein sequence | MANNVSIEDV PLNGFHQLLS IRSGGGWVLD GYVLSIIGVA MVQLSAALHL SGFWQGMVAA
SALIGIFCGG FLGGLLTGCL GRQKLYFFGP TIFVVCSLAQ FWADSGAALF FFRFLIGVGV
GFEYPVAGSL LVEFMPRKDR GPRLAMLTIL WFAGAALAYM VGNAILDTGR ADAWRLVLAS
PAVIGALLLL VRIGTPESPR WLLSKGRAAE AERVIQQVYG PQFSLENLPE QRPEKKVSLL
SLLHSGYGKR MLFVSVFWSC SVIPVFAVYA FAPTVLQALH LKGAWASFGS VAITLLFVVG
CFVATRLINT VGRRSMLIHS FLWSGLALLG LGLFCDGSEM LVLVLFGAYA VFIGGAQVLQ
LVYPNELFPT EIRSAAVGMG ASLSRIGAAI GTWAVPVALQ GIGVGNTMFA AAGVTLFGLL
VSLAIAPETR ALSLQEAASL SR
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