| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2108 |
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| Symbol | |
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| ID | 1220949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2282177 |
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| End bp | 2283322 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637238503 |
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| Product | porin signal peptide protein |
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| Protein accession | NP_520229 |
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| Protein GI | 17546827 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0434327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC GGCTGTTCAT CGCACTGGCT TCGTGGGCCG TGGTTACGCC TGCGTTTTCG
CAAGGCTCGG TGACCTTGTA TGGGGTGCTC GACGAAGGGC TCAACTATAC GAACAACGTC
GGGGGGCACA GCCAAGTCGC GCTCGCCAGC GGATTTCCGC ATGGCAGTCG ATGGGGGCTC
AAGGGCGCCG AGGCGATCGG TGGCGGGATC AAAACGATCT TCCAGCTCGA GAACGGGTTC
GACGTTGATA GCGGCCGGGC CTTTCAAGGC GGACTGCTGT TCGGGCGCCA GGCGTACGTG
GGCGTGTCCA GTGACACGCT GGGCGCACTC ACCGCTGGCC GCCAGTACGA TGCCGTGGTG
GACTTCCTGG CACAGAACAC CGCCGGCGGT ACCTGGGGCG GATACATGTT CGCGCACCCG
TACGATAGCG ACAACCTGAT CAACACGTTC CGGACCAACA ATGCGGTCAA GTACACCAGC
CCGGCACTGG GTGGCCTGAA GTTCGGGGCC ACGTACGGCT TCAGTAACGA TGTGAAGGCC
TCGAACAATC GGCTGTTCAG CGTTGGGGGC CAATACACCG TTGGCGGATG GCTGCTGTCT
GCCGCCTACC TTCAGGCTGA CCATCCTTCC GCCACGTCCT ACGGCGCGAT CAACAACGGT
GGGGATCAGA ACCTGCTCGG CAGCCGGCTG AGGATCGTCG GCGCCGGGGC TACCTATACC
CTGGGCAAGG CGACCTTGGG GCTCGCGTAC TCCAATACGG ACGTCGGCGA CCCTCAAAGC
TCGGGCTACG TCGGTCCGAT CGTCCCGCCG GTGGGGCGGC TGTCTTCGCT CCGCTTCCAG
AGTTTCGAGG TCAATGTCAA ATATCCGTTT GGCGCGTCGT ATTGGGTCGG CGCGATGTAC
ACCTATACGC GCGCCAGCTT CAACGCTACG TCCGGAAGGC CGCATCCGAC CTACCATTCG
ATCGGGCTGA TGGCGGACCA CCTGTTGTCG AAGCGGACCG ATGTCTACCT GCAAGGGGTG
TATCAGCACG CGGGTGGCGA TACAACCGGT ACGGTTCTCG ATGTGGCCTA TGTGCCCGGT
GCCGCGGGGG TCTCATCCAA TCGGAATCAG GTGTTGCTTC GCGCAGGCGT TCGCCATTTT
TTCTAG
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| Protein sequence | MKIRLFIALA SWAVVTPAFS QGSVTLYGVL DEGLNYTNNV GGHSQVALAS GFPHGSRWGL
KGAEAIGGGI KTIFQLENGF DVDSGRAFQG GLLFGRQAYV GVSSDTLGAL TAGRQYDAVV
DFLAQNTAGG TWGGYMFAHP YDSDNLINTF RTNNAVKYTS PALGGLKFGA TYGFSNDVKA
SNNRLFSVGG QYTVGGWLLS AAYLQADHPS ATSYGAINNG GDQNLLGSRL RIVGAGATYT
LGKATLGLAY SNTDVGDPQS SGYVGPIVPP VGRLSSLRFQ SFEVNVKYPF GASYWVGAMY
TYTRASFNAT SGRPHPTYHS IGLMADHLLS KRTDVYLQGV YQHAGGDTTG TVLDVAYVPG
AAGVSSNRNQ VLLRAGVRHF F
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