| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2104 |
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| Symbol | |
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| ID | 1220945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2279232 |
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| End bp | 2279978 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238499 |
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| Product | amino-acid transmembrane ABC transporter protein |
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| Protein accession | NP_520225 |
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| Protein GI | 17546823 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATATC AATTCGACTT TGGCGCCGTC TTCAGTTACA GCGGCCAGTT GGCGCAGGGC
GCCGGCTTTA CGCTCGCGCT CACGGCGGCG GGCGCTGTGC TCGGCGGCGC CATCGGCTTG
GCTGGGGGCG TGTGCCGCGC CTGGCGCATC GCGCCCTTTA ACGGGCTGTT CAAGGTGTAT
GTGGAGGCCA TCCGCAACAC GCCCTTCCTG ATTCAGCTGA TGTTCGTGTT CTTCGGCTTG
CCCTCGCTGG GCCTGCAGAT CAACGAATGG CAAGCCGCCT TGCTCACAAC GGTGGTCAAC
CTGGGGGCCT ACATCACCGA GATCGTGCGC GCGGGCATCC AGGAAACACC GCGTGGCCAG
TTGGAAGCTG CCAGCGCGCT GGCCATGAGC CGCTGGACGT GCTTTCGTCA TGTGGTGTTG
CGGCCGGCGC TGCAGAAGGT CTGGCCGGCA CTGAGCAGCC AGATCGTGAT CGTGATGCTG
GGCACCTCGG TGGTCTCGCA GATCGCCGCG CAGGACCTGA CCTTTGCCGC CAACTTCATC
CAGTCGCGCA ACTTCCGCGC CTTTGAAACC TATCTGGTGG TCACGGCGCT GTACTTCGCG
CTGGCCCTGT TGCTGCGTCA GTTGCTGGCC TGGATTGCCC AGCGCTTTGT CGTGGTTCGC
CGCACACCGG CTGCACCTGC CTCAGCGGCC GCACCTGCGG CAGCACGCAC AGCCACAGCC
ACCACCTCAG CCCGGAACGC CGCATGA
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| Protein sequence | MAYQFDFGAV FSYSGQLAQG AGFTLALTAA GAVLGGAIGL AGGVCRAWRI APFNGLFKVY
VEAIRNTPFL IQLMFVFFGL PSLGLQINEW QAALLTTVVN LGAYITEIVR AGIQETPRGQ
LEAASALAMS RWTCFRHVVL RPALQKVWPA LSSQIVIVML GTSVVSQIAA QDLTFAANFI
QSRNFRAFET YLVVTALYFA LALLLRQLLA WIAQRFVVVR RTPAAPASAA APAAARTATA
TTSARNAA
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