Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2095 |
Symbol | xdhA |
ID | 1220936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2267318 |
End bp | 2268868 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637238490 |
Product | putative xanthine dehydrogenase (subunit A) oxidoreductase protein |
Protein accession | NP_520216 |
Protein GI | 17546814 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCAGT TACAGACACG AGACAGGCGC AAGATCCCCA TGGAGACTCA GTCCATCCGC TTTTTCCATC GCGGGCAGGT CCGCACCGTG ACGCACGCCC CGATCACCCG GACGGTGCTG CAGTACCTGC GTGAAGACGC CCACTGCACA GGCACCAAAG AAGGGTGCGC GGAGGGCGAT TGCGGTGCAT GCACGGTGGT GCTCGGCGAA CTGCAGCCCG ATGGCAGCAT CGGGCTGAAG GCCGTCAACG CGTGCATCCA GTTCCTGCCC ACGCTGGACG GCAAGGCCCT GTTCACCGTC GAGGACGTGC GCGGCCAGAA CGGCACGCTG CACCCGGTAC AGCAGGCGCT GGTCGAGTGC CATGGCTCGC AGTGCGGCTT CTGCACGCCG GGCTTCGTGA TGTCGCTGTA CGCGCTGTAC GAGAACACAG GGCATGCGCC GCCGCCCTCG CGCGAGGCGA TCTGCGATGC GCTGACCGGC AACCTGTGCC GCTGCACCGG CTACCGCCCC ATCATCGACG CCGGCCAGCG CATGTACGCC CTGCCCGCGC CCGCCGGCAT CGACCGCACG CAGCTGGCCG AAACGCTGCG CGCCATCCAG CGCACCGAGA CCTTCTGCTA CGCGCCAGCC GGCGTCGAAA ACGCGCCGCG CTTCTACGCG CCGCGCACCG TCTCCGCCTT CGCCGCGCTG AAGGCGGCCC ACCCGGACAT CCGCGTCCTG GCCGGCAGCA CCGACCTCGG CCTGTGGGTC ACCAAGCAGT TGCGCGAGCT GGGCGACCTC CTCTACGTGG GCCAGGTGGC CGACCTGTGC GCACTGGACA AGCGCGACGG CTGGCTCGAG ATCGGCGCCG CCGCGACGCT GGAGCAAGCG TATGCCTTCC TCGCCGAGGA CTACCCCGAA CTCACCGAAA TGTGGCGCCG CTTCGGCTCG CTGCCGATCC GCAATGCCGG CACGCTGGGC GGCAACATCG CCAACGGCTC GCCGATCGGC GACTCGGCCC CGGCGCTGAT CGCGCTGGGT GCGCGCGTCG TGCTGCAGCG CGGTGACGCA CACCGCGAGC TGCCGCTGGA AGACCTCTAC CTGGCCTACA TGAAGCACGC GATGGTGCCG GGCGAGTTCG TCGCCAGCCT GCGCGTGCCG GCGCGCGCGG GCCGCGATGC GCTGCGCTTT CGCACGTACA AGCTGTCCAA GCGCTTCGAC GAAGACATCT CCGCCGTGTG CGCGGCGCTG GCCATCGAGC TGGACGGCGG CATCGTGCGC AGCGCCCGCA TCGCCTACGG CGGCATGGCC GCCACCTCCA AGCGCGCCCC CGAGACCGAA GCCGCCATCA CCGGCAAGCC GTGGGACGAA GCGACCGCGC GGGCTGCCAT GGCCGCCATG TCGCGCGACT ACGCCCCGCT GACCGACATG CGCGCCACCG AGCACTACCG CCGCACCTCG GCCGCCAACA CGGTGTACCG CTTCTGGCTC GAAACCCGAC CCGATGCCCC GCTGCCGGCG GCACAGATCA ACGTGCGCGC GGTCGAACCG GATATCCCGA CCGTGGCCTG A
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Protein sequence | MVQLQTRDRR KIPMETQSIR FFHRGQVRTV THAPITRTVL QYLREDAHCT GTKEGCAEGD CGACTVVLGE LQPDGSIGLK AVNACIQFLP TLDGKALFTV EDVRGQNGTL HPVQQALVEC HGSQCGFCTP GFVMSLYALY ENTGHAPPPS REAICDALTG NLCRCTGYRP IIDAGQRMYA LPAPAGIDRT QLAETLRAIQ RTETFCYAPA GVENAPRFYA PRTVSAFAAL KAAHPDIRVL AGSTDLGLWV TKQLRELGDL LYVGQVADLC ALDKRDGWLE IGAAATLEQA YAFLAEDYPE LTEMWRRFGS LPIRNAGTLG GNIANGSPIG DSAPALIALG ARVVLQRGDA HRELPLEDLY LAYMKHAMVP GEFVASLRVP ARAGRDALRF RTYKLSKRFD EDISAVCAAL AIELDGGIVR SARIAYGGMA ATSKRAPETE AAITGKPWDE ATARAAMAAM SRDYAPLTDM RATEHYRRTS AANTVYRFWL ETRPDAPLPA AQINVRAVEP DIPTVA
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