Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2086 |
Symbol | |
ID | 1220927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2258360 |
End bp | 2259055 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637238481 |
Product | putative transcription regulator protein |
Protein accession | NP_520207 |
Protein GI | 17546805 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA AGCCGCACGC CACCGGACCC CGCCGCACCC GCGACCGCAT CCTCGAAGTG TCGCTGCGCC TGTTCAACGA GCTGGGTGAG CCCAACGTCA CGACCACGAC GATCGCCGAA GAGCTGGAGA TCAGCCCGGG CAACCTGTAC TACCACTTCC GCAACAAGGA CGACATCATC AACTCGATCT TCGTCCAGTT CGAGCAGGAG ATCAGCCGCC GCCTGCGGCT GCCGGATGAT CACAAGGCCA CGCTGGACGA AACCTGGGGC TATCTGCAGT ACATGTCGGA GTTCATCTGG AACTACCGCT TCCTGTACCG CGACATCAAC GACCTGCTGG CGCGCAACCG CATGCTGGAG CTGAACTTCA AGCGCATCGT CGAGCAGAAG CGCCATTTCG CGATGGACAT CTGCCATCAG TTCATCCAGG ACGGCGAGAT GGAGGCGACG CCCGAACAGG TGGACGCGAT CTGCACCAAC ATGGTTGTGG TGGGCACCTA TTGGCTGTCG TTCCAGTTCG TGCAGCATCC GCGCCAGTAC AACGATCCGA ACGCCATCCG CGACCACCTG CACGGCGCGA GCTATCACAT CCTGTCCATT CTCGCGCCCT ACCTGCGCGG CAAACCCCGG CGCGCCTTCG ACCTGCTGGC GGTGAGCCGC AGCAGCGATC CGACGGCCAC CCACCCCGCT CCATGA
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Protein sequence | METKPHATGP RRTRDRILEV SLRLFNELGE PNVTTTTIAE ELEISPGNLY YHFRNKDDII NSIFVQFEQE ISRRLRLPDD HKATLDETWG YLQYMSEFIW NYRFLYRDIN DLLARNRMLE LNFKRIVEQK RHFAMDICHQ FIQDGEMEAT PEQVDAICTN MVVVGTYWLS FQFVQHPRQY NDPNAIRDHL HGASYHILSI LAPYLRGKPR RAFDLLAVSR SSDPTATHPA P
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