Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2077 |
Symbol | ilvI |
ID | 1220918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2249827 |
End bp | 2251584 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637238472 |
Product | acetolactate synthase 3 catalytic subunit |
Protein accession | NP_520198 |
Protein GI | 17546796 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGC CAAGCGCGGA ATTTTCCCAC GCCAATAGCG GTTCACCTGC CGAAATGATG GGGTCTGACA TCCTCGTCAA TGCGCTCGCG GCAGAAGGCG TCGAGTTCGT CTGGGGTTAC CCGGGCGGCG CGGTGCTCTA TATCTACGAC GCGTTCTACA AGCAGAACAA GATCGAACAC ATCCTGGTGC GCCACGAGCA GGCGGCGGTC CATGCGGCCG ACGGCTATGC GCGCGCCACG GGCAAGGTCG GGGTCGCCCT GGTGACGTCC GGCCCGGGCG TGACCAATGC CGTGACCGGC ATCGCCACCG CCTACCTGGA TTCGATCCCG ATGGTGATCA TCACCGGCAA CGTGCCGACG CACGCCATCG GCCAGGACGC CTTCCAGGAA TGCGACACCG TCGGCATCAC GCGCCCGATC GTCAAGCACA ACTTCCTGGT CAAGGACGTG CGCAACCTCG CTTCGACCAT CAAGAAGGCG TTCTACATCG CCTCGACCGG CCGTCCGGGT CCGGTGGTGG TGGACATCCC GAAGGATGTC TCGCGCGAGC TGTGCAAGTA CGAGTATCCG AAGACCATCG AGATGCGCTC GTACAACCCG GTCAACAAGG GCCACTCCGG CCAGATCCGC AAGGCCGTGA GCCTGCTGCT GCAGGCCGAG CGTCCGTACA TCTACACCGG CGGCGGGGTG GTGCTGGCCA ATGCCAGCGA AGAGCTGCGC CAGCTGGCGG CCCTCACCGG CTACCCGGTG ACGAACACGC TGATGGGTCT GGGCGCCTTC CCCGGCGCCA GCAAGCAGTT CCTCGGCATG CTGGGCATGC ATGGCACGTA CGAAGCCAAC ATGGCCATGC AGCACTGCGA CGTGCTGATC GCCGTCGGCG CGCGCTTCGA TGACCGCGTG ATCGGCAGCC CGGCGCACTT CGCCTCGCAG CCGCGCAAGA TCATCCACAT CGACATCGAT CCGTCGTCCA TTTCCAAGCG GGTCAAGGTG GACATCCCCA TCGTCGGCAA CGTCAAGGAC GTGCTGCAGG AGATGATCGC CCAGATCCAG GCGGGCGAGG CCAAGCCGAA CAAGACGGCG CTCGCCAAGT GGTGGGAGCA GATCGAGCAG TGGCGCAGCG TCGACTGCCT GAAGTACGAC CGCACCTCCG AGATCATCAA GCCGCAGTAC GTGGTCGAGA AGATCTGGGA ACTGACCGCG GGCGATGCCT TCGTCTGTTC CGACGTGGGC CAGCACCAGA TGTGGGCCGC GCAGTTCTAC AAGTTCAACG AGCCGCGCCG CTGGATCAAC TCCGGCGGTC TGGGCACGAT GGGCGTGGGC CTGCCGTATG CCATGGGCGT CAAGAAGGCG TTCCCGGACA AGGAGGTCGT CACCATCACC GGTGAGGGCT CGATCCAGAT GTGCATCCAG GAACTCTCCA CCTGTCTGCA GTACGACACG CCGGTGAAGA TCTGCTCGCT CAACAACGGC TACCTGGGCA TGGTGCGCCA GTGGCAGGAG ATCGAGTACG ACAACCGTTA TTCGCACTCC TACATGCAGG CGCTGCCTGA CTTCGTGAAG CTGGCCGAAG CGTATGGCCA CGTGGGCATG CGGATCGAAA AGACCGCCGA TGTCGAGCCC GCGCTGCGCG AAGCCTTCCG ACTCAAGGAC CGCACCGTGT TCCTCGACTT CCAGACCGAC CCGACCGAAA ACGTCTGGCC GATGGTCCAG GCAGGCAAGG GCATCTCTGA AATGCTGCTC GGCGCGGAGG ATCTGTAA
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Protein sequence | MNMPSAEFSH ANSGSPAEMM GSDILVNALA AEGVEFVWGY PGGAVLYIYD AFYKQNKIEH ILVRHEQAAV HAADGYARAT GKVGVALVTS GPGVTNAVTG IATAYLDSIP MVIITGNVPT HAIGQDAFQE CDTVGITRPI VKHNFLVKDV RNLASTIKKA FYIASTGRPG PVVVDIPKDV SRELCKYEYP KTIEMRSYNP VNKGHSGQIR KAVSLLLQAE RPYIYTGGGV VLANASEELR QLAALTGYPV TNTLMGLGAF PGASKQFLGM LGMHGTYEAN MAMQHCDVLI AVGARFDDRV IGSPAHFASQ PRKIIHIDID PSSISKRVKV DIPIVGNVKD VLQEMIAQIQ AGEAKPNKTA LAKWWEQIEQ WRSVDCLKYD RTSEIIKPQY VVEKIWELTA GDAFVCSDVG QHQMWAAQFY KFNEPRRWIN SGGLGTMGVG LPYAMGVKKA FPDKEVVTIT GEGSIQMCIQ ELSTCLQYDT PVKICSLNNG YLGMVRQWQE IEYDNRYSHS YMQALPDFVK LAEAYGHVGM RIEKTADVEP ALREAFRLKD RTVFLDFQTD PTENVWPMVQ AGKGISEMLL GAEDL
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