| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2070 |
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| Symbol | |
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| ID | 1220911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2242576 |
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| End bp | 2243832 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238465 |
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| Product | transporter signal peptide protein |
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| Protein accession | NP_520191 |
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| Protein GI | 17546789 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.639819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGTC TGTTGATGGC TGCGCTGGCG GCCATGGGGC TGTGTGGCGC CGCCGGCGCC
CAGCCCGCGG TCGCGCCGAT CCGGCTGGCA TTGATCGAGG GCCTGTCCGG CCCGTTCGCC
AACGCGGGCG AGGCAGTGGA CCGCAACCTG CGCATCGCCA TCGAGGGCGT GAACGCGCGC
GGCGGAGTCC GGTTGCCGGA CGGGCGCCAT CCGCTCGCCC TGGTGCGGTT CGACAGCAAG
AACATGGTCG ATGAGTCCCT GCTGCAGCTG CAGGCGGCCA GCGATGCGGG CATCCGCTTT
GTCCTGCAGG GCAACAGCTC GGCGGCCGCG GCGGCGCTTT CGGCGTCGAT CGCGCGCCAC
AACGATCGCG CTCCGGACGC GCGCATGCTG TTCCTCAACT ACGCCGCCGT CGATCCGGCG
CTGACCAACG AGGCCTGCAG CTTCTGGCAT TTCCGCTTCG ACGCCTCGGC CGACATGCGC
ATGCATGCGC TGACCGAAGT GATCCGCGCC GATCCGTCCG TCAAGCAGGT CTACCTGATT
GGCCAGGACT ACACCTTCGG CCGGCAGGTG GCGCAGCTGG CGCGCCGGCA ACTGGGCGAG
AAGCGGCCGG ACATCGCCAT CGCCGGCGAG GTGCTGCATC CGATCGGCAA GGTGAAGGAT
TTCGCGCCCT ACGTGGCCCG CATCGCGGCG TCGGGCGCCG ATGCCGTCAT CACGGGCAAC
TGGGGCAATG ACCTGACGCT GCTGGTCAAG GCGGCGCGCG ATGCCGGCCT GAAAGCCCGC
TTTTTCACCT TCTACGGCAA TTCGCTCGGT GCCCCGGGCG CGATGGGCGA GGCGGGTGTC
GGCCGGGTCG TGGCGGTGGC GGAGTGGCAC CCGAACCTGG GCGGGACGGG GTCCGACGCG
TTCTACAAGG CGTTCCGCGC GCGTTACCCG GCGCCGGTGG ACGACTATCC GCTGCTGCGC
GACCAGATGA TGATCGACCT GCTGGCCACC GCCATCGAGC GTGCCGGCAC GACCGAAGCC
GGCGCGGTCG CGCGTGCGCT GGAAGGCGCT TCGCTCGACA CCGGCTTCCA TCGCCTCACG
CTGCGGGCCG AGGATCACCA GGCCATCCAG CCGCTGGTCG TCATGCAGAT GGCGCGCGCG
GGCACGCCGG GCGCGCCGTT CGATATCGAG GGATCCGGCT ACGGTTTCCG GACGCTGAAA
GTGATTCCTC CAGCCCAAAC GGCTCTGCCC ACCACGTGCC GGATGGCGCG CTATTGA
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| Protein sequence | MFRLLMAALA AMGLCGAAGA QPAVAPIRLA LIEGLSGPFA NAGEAVDRNL RIAIEGVNAR
GGVRLPDGRH PLALVRFDSK NMVDESLLQL QAASDAGIRF VLQGNSSAAA AALSASIARH
NDRAPDARML FLNYAAVDPA LTNEACSFWH FRFDASADMR MHALTEVIRA DPSVKQVYLI
GQDYTFGRQV AQLARRQLGE KRPDIAIAGE VLHPIGKVKD FAPYVARIAA SGADAVITGN
WGNDLTLLVK AARDAGLKAR FFTFYGNSLG APGAMGEAGV GRVVAVAEWH PNLGGTGSDA
FYKAFRARYP APVDDYPLLR DQMMIDLLAT AIERAGTTEA GAVARALEGA SLDTGFHRLT
LRAEDHQAIQ PLVVMQMARA GTPGAPFDIE GSGYGFRTLK VIPPAQTALP TTCRMARY
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