| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2067 |
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| Symbol | pnp |
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| ID | 1220908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2239684 |
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| End bp | 2241837 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637238462 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | NP_520188 |
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| Protein GI | 17546786 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACA AGATCGTCAA GGAATTCCAG TGGGGCAACC ACAAGGTGCG CATGGAGACG
GGCGAGATCG CTCGCCAGGC CAGCGGCGCC GTGCTGCTCG ACATGGACGA CACCGTGGTG
CTGGCCACCG TGGTGGGCGC CAAGAACGCC AAGCCGGGCC AGGATTTCTT CCCGCTGACC
GTCGACTACA TCGAGAAGAC CTACGCCGCC GGCAAGATCC CGGGTGGCTT CTTCAAGCGT
GAAGGCCGTC CGTCGGAAAA CGAGACGCTG ACCTCGCGCC TGATCGACCG TCCGCTGCGT
CCGCTGTTCC CGGAAGGCTT CTACAACGAA GTCCAGGTCG TCATCCACGT GCTGTCGATC
AACCCGGAAG TGCCGGCCGA CATCCCGGCG CTGGTGGCCG CTTCGGCCGC GCTGGCCGTG
TCGGGCCTGC CGTTCAACGG CCCGGTGGGC GCCGCCCGCG TGGGTTACAA GGACGGCCAG
TACCTGCTGA ACCCGAACCG CGCGCAACTG GCGCATTCGG ACCTGGACCT GGTGGTTGCC
GGCACCGAGC GTGCCGTGCT GATGGTCGAA TCCGAAGCCA ACCAGCTGTC GGAAGAGGTG
ATGCTGGGCG CCGTGGTGTA CGGCCATGAG CAGATGCAGA TCGCCATCAA TGCGATCCAC
GACCTGGTGC GCGACGGCGG CAAGCCGGAG TGGGACTGGC AAGCGGCGCC GAAGAACGAA
GCCCTGGTCG CCAAGGTGTC CGAGCTGGGC TTGGCCGATC TGCAAGCCGC TTACCAGCTG
CGCCAGAAGT CGGCCCGCAG CCAGAAGCTG AAGGAAGTCT ACGCATCGGT CGCGGCCAAG
CTGGCCGAAG CCGGCGTGGA AGCCGACGGC GTGGAAGTCG ACAACATCCT GTTCGAGCTC
GAATCGAAGA TCGTGCGCGG CCAGATCCTG AACGGCGAGC CGCGTATCGA CGGTCGCGAC
ACCCGCACGG TGCGCCCGAT CGAGATCCGC TCGTCGGTGC TGCCGCGCGC GCACGGCTCG
GCGCTGTTCA CGCGCGGTGA GACGCAAGCG CTGGTGGTGG CCACCCTGGG CACCAAGAGC
GACGAGCAGA TCATCGACGC GCTGCAGGGC GAGTACCGCG ACCGCTTCAT GCTCCACTAC
AACATGCCGC CGTTCGCCAC CGGCGAAACC GGCCGCGTGG GCAGCCCGAA GCGCCGCGAA
ATCGGCCACG GCCGCCTGGC CAAGCGCGCG CTGATCCCGG TGCTGCCGAA GGAAGACGAA
TTCGCCTACA CGATTCGTCT GGTGTCGGAG ATCACCGAGT CGAACGGCTC GTCGTCGATG
GCTTCGGTCT GCGGTGGCTG CCTGGCGCTG ATGGATGCCG GCGTGCCGGT CAAGGCGCAC
GTGGCCGGCG TGGCCATGGG CCTGATCCTG GAGGGCAACA AGTTCGCCGT GCTGACCGAC
ATCCTGGGCG ACGAAGATCA CCTGGGTGAC ATGGACTTCA AGGTGGCCGG TACCGATAAC
GGCATCACCG CGCTGCAGAT GGACATCAAG GTGCAGGGCA TCACCAAGGA AATCATGCAG
GTCGCTCTGG CGCAGGCCAA GGAAGGCCGT CTGCATATCC TGGGCAAGAT GCAGGCCGCG
ATGGGCCATG CACGCACCGA ACTGTCGGAG CATGCGCCGC GCATGATCAC CGTCAAGATC
AATCCGGAGA AGATCCGCGA CGTGATCGGC AAGGGCGGCT CGACCATCCA GGCGCTGACC
AAGGAAACCG GCTGCACGAT CGACATCCAG GAAGACGGCA CGATCACCAT CGCGTCGACC
TCGTCCGAGG GCATGGCCGA AGCCAAGCGC CGCATCGAAG GCATCACGGC CGAAGCCGAA
GTGGGCAAGA TCTACAGCGG CACCGTGCTC AAGCTGCTGG ACTTCGGTGC GATCGTCAAC
ATCCTGCCGG GCAAGGACGG CCTGCTGCAC ATCTCGGAGA TCGCCAACGA GCGCGTCAAC
CAGGTGTCGG ACTACGTCAA GGAAGGCCAG ATGGTGCGCG TGAAGCTGCT GAGCACCGAC
GAAAAGGGCC GCATGCGCCT GTCGATCAAG GCCGCCAAGG CTGAGGAAGG CGATGTGCCG
GCCACCGCGC CGCAGGCGCC GGGCGCCGGC GACGCGACGT CGCAGCAGCA GTAA
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| Protein sequence | MFNKIVKEFQ WGNHKVRMET GEIARQASGA VLLDMDDTVV LATVVGAKNA KPGQDFFPLT
VDYIEKTYAA GKIPGGFFKR EGRPSENETL TSRLIDRPLR PLFPEGFYNE VQVVIHVLSI
NPEVPADIPA LVAASAALAV SGLPFNGPVG AARVGYKDGQ YLLNPNRAQL AHSDLDLVVA
GTERAVLMVE SEANQLSEEV MLGAVVYGHE QMQIAINAIH DLVRDGGKPE WDWQAAPKNE
ALVAKVSELG LADLQAAYQL RQKSARSQKL KEVYASVAAK LAEAGVEADG VEVDNILFEL
ESKIVRGQIL NGEPRIDGRD TRTVRPIEIR SSVLPRAHGS ALFTRGETQA LVVATLGTKS
DEQIIDALQG EYRDRFMLHY NMPPFATGET GRVGSPKRRE IGHGRLAKRA LIPVLPKEDE
FAYTIRLVSE ITESNGSSSM ASVCGGCLAL MDAGVPVKAH VAGVAMGLIL EGNKFAVLTD
ILGDEDHLGD MDFKVAGTDN GITALQMDIK VQGITKEIMQ VALAQAKEGR LHILGKMQAA
MGHARTELSE HAPRMITVKI NPEKIRDVIG KGGSTIQALT KETGCTIDIQ EDGTITIAST
SSEGMAEAKR RIEGITAEAE VGKIYSGTVL KLLDFGAIVN ILPGKDGLLH ISEIANERVN
QVSDYVKEGQ MVRVKLLSTD EKGRMRLSIK AAKAEEGDVP ATAPQAPGAG DATSQQQ
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