| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2064 |
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| Symbol | tpiA |
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| ID | 1220905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2236772 |
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| End bp | 2237518 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238459 |
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| Product | triosephosphate isomerase |
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| Protein accession | NP_520185 |
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| Protein GI | 17546783 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0168982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.648241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGCAA GACCGAAGCT GGTGGTGGGC AACTGGAAGT TGCATGGCAG CCTGAACGGC
AACGCCGAGC TGCTTGAGAA GATCAAGGCA GCCGGGCAGA CCCGCGCCGC GCTGGCCGTC
TGTGCACCGT TCCCGTACCT GGCCCAGTGC CAGTCGGTGC TCGCCGGCTC GTCGGTGGCC
TGGGGCGCGC AGGACGTGTC GGCCGAGACG CGCGGCGCCT TCACCGGCGA GGTGGCGGCG
TCGATGTTGT CGGAATTTGG CTGCGGCTAC GCGATCGTCG GGCACTCGGA ACGTCGCACG
TATCACGGCG AGACCGACGC GCAGGTGGCG ATCAAGGCGC TGCGCGCGCT GGAGCACGGC
ATCACCCCGA TCGTCTGTGT CGGCGAAACG CTGGCGCAAC GCGAGGCCGG AGAGACCGAG
CTAGTCGTGG CCCGTCAGTT GGAGGCGGTG CTGGAGTCGC TGTCGGTCGA ACAGCTGGGT
CACATCGTCG TGGCCTACGA GCCGGTCTGG GCCATCGGTA CCGGCAAGAC CGCGACCAGC
GAGCAGGCGC AGGCAGTGCA CGCGTTCCTG CGTGGCCGCG TGGCTGCTTG CGATGCCGGT
GTCGCGCAGC GCATGCCGAT CCTGTACGGC GGCAGCGTCA AGCCGGACAA CGCGGCCGAA
CTGTTTACGA TGGCAGACAT CGATGGCGGC CTGATCGGCG GCGCATCCCT GAAGGCCGAA
GATTTCCTGG CGATCGGCCG GGCCTGA
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| Protein sequence | MSARPKLVVG NWKLHGSLNG NAELLEKIKA AGQTRAALAV CAPFPYLAQC QSVLAGSSVA
WGAQDVSAET RGAFTGEVAA SMLSEFGCGY AIVGHSERRT YHGETDAQVA IKALRALEHG
ITPIVCVGET LAQREAGETE LVVARQLEAV LESLSVEQLG HIVVAYEPVW AIGTGKTATS
EQAQAVHAFL RGRVAACDAG VAQRMPILYG GSVKPDNAAE LFTMADIDGG LIGGASLKAE
DFLAIGRA
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