| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2057 |
|---|
| Symbol | nuoF |
|---|
| ID | 1220897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2231315 |
|---|
| End bp | 2232610 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637238451 |
|---|
| Product | NADH dehydrogenase I chain F |
|---|
| Protein accession | NP_520178 |
|---|
| Protein GI | 17546776 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.728933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0269366 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCC TGCACGATCG ACACATCCAG CCGCTGATTC TCGCCGGCCT GAACGGCGAC
AACTGGCACC TCGAAGACTA TGTCAAGCGC GGCGGTTACC AGCAGCTCAA GCGCATCCTG
ACGGAAAAGA TTTCGCCTGA ACAGATCATC GCCGACGTGA AGGCCTCGGG CCTGCGCGGC
CGTGGCGGCG CGGGCTTCCC GACCGGCCTG AAGTGGAGCT TCATGCCGCG CCAGTTCCCG
GGCCAGAAGT ACCTGGTCTG CAACACGGAC GAGGGCGAGC CCGGCACGTT CAAGGATCGC
GACATCATCC GCTACAACCC GCACGCCTTG ATCGAAGGCA TGGCCATCGG CGGCTACGCG
ATGGGCATCA CCGTGGGCTA CAACTACATC CACGGCGAGA TCTGGAACGA GTACAAGCTC
TTCGAGCAGG CGCTCGAAGA GGCGCGTGCC GCAGGTTTGC TGGGCGACAA CATTCTCGGC
TCCGGCTTCA ACTTCCAGCT GCATGCGCAC CATGGCTATG GCGCGTACAT CTGCGGCGAG
GAAACCGCGC TGCTCGAATC GCTGGAAGGC AAGAAGGGCC AGCCGCGCTT CAAGCCGCCG
TTCCCGGCCA GCTTCGGCCT GTACGGCAAG CCGACCACCA TCAACAACAC CGAAACCTTT
GCCGCGGTGC CGTTCCTGCT GTCCATCGGT CCGGACAACT ACCTGAAGAT GGGCAAGCCG
AACAACGGCG GCTCGAAGAT CTTCTCGGTG TCCGGCGACG TGGAGCGCCC GGGCAACTAC
GAGATTCCGC TCGGCACGCC GTTCTCCAAG CTGCTGGAAC TGGCCGGCGG CATGCGTGGC
GGCAAGAAGC TCAAGGCGGT CATCCCGGGT GGCTCGTCGG CGCCGGTGGT GCCGGCCGAC
CTGATGATGG CCTCCGACAT GGACTACGAC TCGATCGCCA AGGCCGGCTC GATGCTGGGT
TCGGGCGCCG TGATCGTGAT GGACGAGACG CGCTGCATGG TGAAGTCGCT GCTGCGCCTG
TCGTACTTCT ACTTCGAGGA GTCGTGCGGC CAGTGCACGC CGTGCCGTGA GGGCACCGGC
TGGCTGTACC GCGTGGTCGA TCGCATCGAG CACGGCAAGG GCCGCCAGGA AGATCTGGAC
CTGCTCAACA ACGTGGCCGA GAACATCATG GGCCGGACCA TCTGCGCGCT GGGCGATGCC
GCCGCGATGC CGGTCCGCGG CATGCTCAAG CACTACTGGG ACGAGTTCGC GTATCACGTC
GAGCACAAGC AGTGCATGGT GCCCACCTAC ATCTAA
|
|---|
| Protein sequence | MTSLHDRHIQ PLILAGLNGD NWHLEDYVKR GGYQQLKRIL TEKISPEQII ADVKASGLRG
RGGAGFPTGL KWSFMPRQFP GQKYLVCNTD EGEPGTFKDR DIIRYNPHAL IEGMAIGGYA
MGITVGYNYI HGEIWNEYKL FEQALEEARA AGLLGDNILG SGFNFQLHAH HGYGAYICGE
ETALLESLEG KKGQPRFKPP FPASFGLYGK PTTINNTETF AAVPFLLSIG PDNYLKMGKP
NNGGSKIFSV SGDVERPGNY EIPLGTPFSK LLELAGGMRG GKKLKAVIPG GSSAPVVPAD
LMMASDMDYD SIAKAGSMLG SGAVIVMDET RCMVKSLLRL SYFYFEESCG QCTPCREGTG
WLYRVVDRIE HGKGRQEDLD LLNNVAENIM GRTICALGDA AAMPVRGMLK HYWDEFAYHV
EHKQCMVPTY I
|
|---|
| |