| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2041 |
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| Symbol | |
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| ID | 1220881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2214561 |
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| End bp | 2215817 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238435 |
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| Product | putative urea/short-chain amide-binding signal peptide protein |
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| Protein accession | NP_520162 |
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| Protein GI | 17546760 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.300905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC GTGAGCTGCT CAAGCTGTCG GCCGTTGCCG CCGCAGCGCT GTTGTCGGTA
CCGCATGTCG CGCTGGCCCA GGCCAAGGCG CCGATCAAGG TCGGTGTCCT GCATTCGCTG
TCGGGCACCA TGGCCATCTC GGAGACGTCG CTCAAGGACG TCGCGCTGAT GACGATCGAC
GAGATCAACA AGAGCGGTGG CGTGCTGGGC CGCAAGCTGG AGCCGGTGGT GGTGGACCCG
GCCTCGAACT GGCCGCTGTT CGCCGAGAAG GCGCGCGGCT TGCTGACGCA GGACAAGGTG
GCGGTCACGT TCGGCTGCTG GACTTCGGTG TCGCGCAAGT CGGTGCTGCC GGTGTACGAG
GAACTGAACG GCCTGCTGTT CTACCCGGTG CAGTACGAGG GCGAGGAGAT GTCCAAGAAT
GTCTTTTACA CCGGTGCGGC GCCCAACCAG CAGGCGATTC CCGCGGTGGA ATACCTGATG
AGCAAGGAAG GCGGCGGTGC CAAGCGCTTC TTCCTGCTGG GCACCGACTA CGTGTATCCG
CGCACGACCA ACAAGATCCT GCGCGCCTTC CTGCACAGCA AGGGCGTGAA GGACAGCGAC
ATCGAAGAGG TCTACACGCC GTTCGGCCAT GCCGACTACC AGACCATCGT CGCCAACATC
AAGCGGTTCG CGCAGGGCGG CAAGACGGCG GTGGTGTCGA CCATCAACGG CGACTCCAAC
GTGCCGTTCT ACAAGGAGCT GGGCAACGCG GGCCTGAAGG CCAAGGACGT GCCGGTGGTG
GCCTTCTCGG TGGGCGAGGA GGAGCTGCGC GGCATCGACA CCAAGCCGCT GGTCGGCCAC
CTGGCGGCGT GGAACTACTT CATGTCGGTC AAGAACCCGG TCAACGACGA TTTCAAGAAG
AAGTGGGCGG CCTGGGTCAA GAGCAACAAC CTGCCGGGCG GCGACAAGCG CGTCACCAAC
GACCCGATGG AAGCCACCTA CGTCGGCATC ATGATGTGGA AGCAGGCGGT GGAGAAGGCC
GGCTCGACCG ACGTGGACAA GGTCCGCAAG GCGATGGTCG GCCAGCAGTT CAAGGCGCCG
TCGGGCTTCA TGCTGGCGAT GAACAACAAC CATCACCTGT CCAAGCCGGT GATGATCGGC
GAGGTGCGCG GCGACGGCCA GTTCAACGTG GTGTGGAAGA CGCCGACGGC GATCCGCGCC
AAGCCGTGGA GCCCGTACAT TCCGGGCAAC GAGGGCAAGC CCGATCAGGT GATGTGA
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| Protein sequence | MKRRELLKLS AVAAAALLSV PHVALAQAKA PIKVGVLHSL SGTMAISETS LKDVALMTID
EINKSGGVLG RKLEPVVVDP ASNWPLFAEK ARGLLTQDKV AVTFGCWTSV SRKSVLPVYE
ELNGLLFYPV QYEGEEMSKN VFYTGAAPNQ QAIPAVEYLM SKEGGGAKRF FLLGTDYVYP
RTTNKILRAF LHSKGVKDSD IEEVYTPFGH ADYQTIVANI KRFAQGGKTA VVSTINGDSN
VPFYKELGNA GLKAKDVPVV AFSVGEEELR GIDTKPLVGH LAAWNYFMSV KNPVNDDFKK
KWAAWVKSNN LPGGDKRVTN DPMEATYVGI MMWKQAVEKA GSTDVDKVRK AMVGQQFKAP
SGFMLAMNNN HHLSKPVMIG EVRGDGQFNV VWKTPTAIRA KPWSPYIPGN EGKPDQVM
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